RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CEP126Q9P2H0 1117 aa19.23■□□□□ 0.67
ECHDC2-223ENST00000542552 CNTNAP1P78357 1384 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 IFIT1P09914 478 aaKnown RBP19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 BCAMP50895 628 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 KRT26Q7Z3Y9 468 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 GGA3Q9NZ52 723 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 ARAP2Q8WZ64 1704 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
ECHDC2-223ENST00000542552 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 WNT10BO00744 389 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 MS4A1P11836 297 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 SLC5A1P13866 664 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 NBPF9Q3BBW0 867 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 DLK2Q6UY11 383 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 MTMR14Q8NCE2 650 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
ECHDC2-223ENST00000542552 ADM5C9JUS6 153 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 ATP8B2P98198 1209 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 ATP2B3Q16720 1220 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 ANGEL2Q5VTE6 544 aaKnown RBP19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 MKRN1Q9UHC7 482 aaKnown RBP19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
ECHDC2-223ENST00000542552 CELF2O95319 508 aaKnown RBP19.19■□□□□ 0.66
ECHDC2-223ENST00000542552 POLA2Q14181 598 aa19.19■□□□□ 0.66
ECHDC2-223ENST00000542552 MFSD14BQ5SR56 506 aa19.19■□□□□ 0.66
ECHDC2-223ENST00000542552 ZBTB22O15209 634 aa19.18■□□□□ 0.66
ECHDC2-223ENST00000542552 SULF1Q8IWU6 871 aa19.18■□□□□ 0.66
ECHDC2-223ENST00000542552 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
ECHDC2-223ENST00000542552 IQSEC3Q9UPP2 1182 aaPredicted RBP19.18■□□□□ 0.66
ECHDC2-223ENST00000542552 TLL2Q9Y6L7 1015 aa19.18■□□□□ 0.66
ECHDC2-223ENST00000542552 ECM29Q5VYK3 1845 aa19.17■□□□□ 0.66
ECHDC2-223ENST00000542552 DEFB115Q30KQ5 88 aa19.17■□□□□ 0.66
ECHDC2-223ENST00000542552 ABT1Q9ULW3 272 aaKnown RBP19.17■□□□□ 0.66
ECHDC2-223ENST00000542552 MYH13Q9UKX3 1938 aa19.17■□□□□ 0.66
ECHDC2-223ENST00000542552 F8W031 263 aaPredicted RBP19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 TFCP2Q12800 502 aa19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 DLGAP5Q15398 846 aa19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 SAPCD2Q86UD0 394 aa19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 TBC1D22AQ8WUA7 517 aa19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.16■□□□□ 0.66
ECHDC2-223ENST00000542552 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 VEGFBP49765 207 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 TIMM10P62072 90 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 GRIK5Q16478 980 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 CFAP100Q494V2 611 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 CDCA5Q96FF9 252 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 ZNF408Q9H9D4 720 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 SERPINA10Q9UK55 444 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 AKAP2Q9Y2D5 859 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 PCDHAC2Q9Y5I4 1007 aa19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 COL1A1P02452 1464 aaPredicted RBP19.15■□□□□ 0.66
ECHDC2-223ENST00000542552 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 SPDYE6P0CI01 402 aa19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 ADORA1P30542 326 aa19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 HHIPL1Q96JK4 782 aa19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 PRMT6Q96LA8 375 aaPredicted RBP19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 TTF2Q9UNY4 1162 aaKnown RBP19.14■□□□□ 0.65
ECHDC2-223ENST00000542552 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 PHKA1P46020 1223 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 PDE3AQ14432 1141 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 DDX19BQ9UMR2 479 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 SCAF8Q9UPN6 1271 aaKnown RBP19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 COG6Q9Y2V7 657 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 SUGT1Q9Y2Z0 365 aa19.13■□□□□ 0.65
ECHDC2-223ENST00000542552 AOX1Q06278 1338 aa19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 SEMA3EO15041 775 aa19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 HDLBPQ00341 1268 aaKnown RBP19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 CCDC102BQ68D86 513 aa19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 APOBEC3FQ8IUX4 373 aaKnown RBP19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 WDR66Q8TBY9 1149 aa19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 MRIQ9BWK5 157 aa19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 GNL3LQ9NVN8 582 aaKnown RBP19.12■□□□□ 0.65
ECHDC2-223ENST00000542552 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
ECHDC2-223ENST00000542552 WDR33Q9C0J8 1336 aaKnown RBP19.11■□□□□ 0.65
ECHDC2-223ENST00000542552 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
ECHDC2-223ENST00000542552 XAGE2Q96GT9 111 aa19.11■□□□□ 0.65
ECHDC2-223ENST00000542552 GBA2Q9HCG7 927 aaPredicted RBP19.11■□□□□ 0.65
ECHDC2-223ENST00000542552 SURF6O75683 361 aaKnown RBP19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 CRKP46108 304 aa19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 C2orf69Q8N8R5 385 aa19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 CAPNS2Q96L46 248 aa19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 GPR108Q9NPR9 543 aa19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
ECHDC2-223ENST00000542552 PDS5AQ29RF7 1337 aaKnown RBP19.09■□□□□ 0.65
ECHDC2-223ENST00000542552 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
ECHDC2-223ENST00000542552 ECE1P42892 770 aa19.09■□□□□ 0.65
ECHDC2-223ENST00000542552 CYP4F22Q6NT55 531 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms