RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 IL1R1P14778 569 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 SP3Q02447 781 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 TSPYL6Q8N831 410 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 ARMC5Q96C12 935 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
UBC-211ENST00000542416 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
UBC-211ENST00000542416 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBC-211ENST00000542416 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
UBC-211ENST00000542416 KLRK1P26718 216 aa11.4□□□□□ -0.58
UBC-211ENST00000542416 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
UBC-211ENST00000542416 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
UBC-211ENST00000542416 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
UBC-211ENST00000542416 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
UBC-211ENST00000542416 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
UBC-211ENST00000542416 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
UBC-211ENST00000542416 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
UBC-211ENST00000542416 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
UBC-211ENST00000542416 CASP7P55210 303 aa11.39□□□□□ -0.59
UBC-211ENST00000542416 FLIIQ13045 1269 aa11.39□□□□□ -0.59
UBC-211ENST00000542416 CRHR2Q13324 411 aa11.39□□□□□ -0.59
UBC-211ENST00000542416 CCDC27Q2M243 656 aa11.39□□□□□ -0.59
UBC-211ENST00000542416 CERS5Q8N5B7 392 aa11.39□□□□□ -0.59
UBC-211ENST00000542416 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
UBC-211ENST00000542416 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
UBC-211ENST00000542416 CLRN2A0PK11 232 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
UBC-211ENST00000542416 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
UBC-211ENST00000542416 RASA3Q14644 834 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 NBPF12Q5TAG4 269 aaPredicted RBP11.38□□□□□ -0.59
UBC-211ENST00000542416 CD99L2Q8TCZ2 262 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 SERPINA10Q9UK55 444 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
UBC-211ENST00000542416 PSME4Q14997 1843 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 TAF5LO75529 589 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 TNNI2P48788 182 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 GTF2A2P52657 109 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 CCDC57Q2TAC2 916 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
UBC-211ENST00000542416 TAF7LQ5H9L4 462 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 G2E3Q7L622 706 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
UBC-211ENST00000542416 CHMP3Q9Y3E7 222 aa11.37□□□□□ -0.59
UBC-211ENST00000542416 IL16Q14005 1332 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 IRS2Q9Y4H2 1338 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 KIF22Q14807 665 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
UBC-211ENST00000542416 OPTNQ96CV9 577 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 ZNF333Q96JL9 665 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 PTPN18Q99952 460 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 CSADQ9Y600 493 aa11.36□□□□□ -0.59
UBC-211ENST00000542416 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 GNRH1P01148 92 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 EN2P19622 333 aaPredicted RBP11.35□□□□□ -0.59
UBC-211ENST00000542416 GJA5P36382 358 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
UBC-211ENST00000542416 SLC4A8Q2Y0W8 1093 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 MS4A4AQ96JQ5 239 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 ELP3Q9H9T3 547 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 ZCCHC17Q9NP64 241 aaKnown RBP11.35□□□□□ -0.59
UBC-211ENST00000542416 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
UBC-211ENST00000542416 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
UBC-211ENST00000542416 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
UBC-211ENST00000542416 SSC5DA1L4H1 1573 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 KIAA0100Q14667 2235 aaKnown RBP11.34□□□□□ -0.59
UBC-211ENST00000542416 CCL15-CCL14A0A0B4J2E2 113 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 SNAP23O00161 211 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
UBC-211ENST00000542416 PRMT2P55345 433 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 FOXO4P98177 505 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 CCL15Q16663 113 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
UBC-211ENST00000542416 TDRD7Q8NHU6 1098 aaKnown RBP11.34□□□□□ -0.59
UBC-211ENST00000542416 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
UBC-211ENST00000542416 PLIN1O60240 522 aa11.33□□□□□ -0.6
UBC-211ENST00000542416 CETPP11597 493 aa11.33□□□□□ -0.6
UBC-211ENST00000542416 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
UBC-211ENST00000542416 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.33□□□□□ -0.6
UBC-211ENST00000542416 TBC1D22AQ8WUA7 517 aa11.33□□□□□ -0.6
UBC-211ENST00000542416 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
UBC-211ENST00000542416 TDRD3Q9H7E2 651 aaKnown RBP11.33□□□□□ -0.6
UBC-211ENST00000542416 HTTP42858 3142 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 MKI67P46013 3256 aaKnown RBP11.32□□□□□ -0.6
UBC-211ENST00000542416 GRM8O00222 908 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms