RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 F8W031 263 aaPredicted RBP20.56■□□□□ 0.88
CCND1-205ENST00000542367 RFX5P48382 616 aaPredicted RBP20.56■□□□□ 0.88
CCND1-205ENST00000542367 FKBP1AP62942 108 aaKnown RBP20.56■□□□□ 0.88
CCND1-205ENST00000542367 ARHGAP45Q92619 1136 aa20.56■□□□□ 0.88
CCND1-205ENST00000542367 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
CCND1-205ENST00000542367 PDE8BO95263 885 aa20.55■□□□□ 0.88
CCND1-205ENST00000542367 RGMBQ6NW40 437 aa20.55■□□□□ 0.88
CCND1-205ENST00000542367 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
CCND1-205ENST00000542367 VGLL2Q8N8G2 317 aa20.55■□□□□ 0.88
CCND1-205ENST00000542367 ZBED3Q96IU2 234 aaPredicted RBP20.55■□□□□ 0.88
CCND1-205ENST00000542367 THSD7BQ9C0I4 1608 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 BCAR3O75815 825 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 LBX1P52954 281 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
CCND1-205ENST00000542367 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 PRAMEF18Q5VWM3 479 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 BEGAINQ9BUH8 593 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
CCND1-205ENST00000542367 FAM205AQ6ZU69 1335 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 EYA2O00167 538 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 INTS3Q68E01 1043 aaKnown RBP20.53■□□□□ 0.88
CCND1-205ENST00000542367 FBXO33Q7Z6M2 555 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 MEIS3Q99687 375 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 HDAC5Q9UQL6 1122 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 PCDHAC2Q9Y5I4 1007 aa20.53■□□□□ 0.88
CCND1-205ENST00000542367 LRRFIP2Q9Y608 721 aaKnown RBP20.53■□□□□ 0.88
CCND1-205ENST00000542367 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
CCND1-205ENST00000542367 HSPA8P11142 646 aaKnown RBP20.52■□□□□ 0.88
CCND1-205ENST00000542367 ZNF157P51786 506 aaPredicted RBP20.52■□□□□ 0.88
CCND1-205ENST00000542367 NOGQ13253 232 aa20.52■□□□□ 0.88
CCND1-205ENST00000542367 CAVIN4Q5BKX8 364 aa20.52■□□□□ 0.88
CCND1-205ENST00000542367 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.88
CCND1-205ENST00000542367 ZIC5Q96T25 663 aa20.52■□□□□ 0.88
CCND1-205ENST00000542367 FAM155AB1AL88 458 aaPredicted RBP20.51■□□□□ 0.87
CCND1-205ENST00000542367 CFAP100Q494V2 611 aa20.51■□□□□ 0.87
CCND1-205ENST00000542367 MFSD14BQ5SR56 506 aa20.51■□□□□ 0.87
CCND1-205ENST00000542367 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
CCND1-205ENST00000542367 FRAT1Q92837 279 aaPredicted RBP20.51■□□□□ 0.87
CCND1-205ENST00000542367 CCDC102AQ96A19 550 aa20.51■□□□□ 0.87
CCND1-205ENST00000542367 IQSEC3Q9UPP2 1182 aaPredicted RBP20.51■□□□□ 0.87
CCND1-205ENST00000542367 FGFR2P21802 821 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 FKBP1BP68106 108 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 PUM3Q15397 648 aaKnown RBP20.5■□□□□ 0.87
CCND1-205ENST00000542367 ATF7IPQ6VMQ6 1270 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 MOB2Q70IA6 237 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 SIL1Q9H173 461 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 TNNQ9UQP3 1299 aa20.5■□□□□ 0.87
CCND1-205ENST00000542367 FRAT2O75474 233 aaPredicted RBP20.49■□□□□ 0.87
CCND1-205ENST00000542367 IFIT1P09914 478 aaKnown RBP20.49■□□□□ 0.87
CCND1-205ENST00000542367 TRIM27P14373 513 aa20.49■□□□□ 0.87
CCND1-205ENST00000542367 BCAMP50895 628 aa20.49■□□□□ 0.87
CCND1-205ENST00000542367 RBM5P52756 815 aaKnown RBP eCLIP20.49■□□□□ 0.871e-9■■■■■ 34.1
CCND1-205ENST00000542367 ATG9AQ7Z3C6 839 aa20.49■□□□□ 0.87
CCND1-205ENST00000542367 PRMT6Q96LA8 375 aaPredicted RBP20.49■□□□□ 0.87
CCND1-205ENST00000542367 SPDYE2BA6NHP3 402 aa20.48■□□□□ 0.87
CCND1-205ENST00000542367 GNAI3P08754 354 aa20.48■□□□□ 0.87
CCND1-205ENST00000542367 SPDYE6P0CI01 402 aa20.48■□□□□ 0.87
CCND1-205ENST00000542367 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
CCND1-205ENST00000542367 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
CCND1-205ENST00000542367 TTF2Q9UNY4 1162 aaKnown RBP20.48■□□□□ 0.87
CCND1-205ENST00000542367 CLRN2A0PK11 232 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 MYO1BO43795 1136 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 NF2P35240 595 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
CCND1-205ENST00000542367 TTLL12Q14166 644 aaPredicted RBP20.47■□□□□ 0.87
CCND1-205ENST00000542367 LPIN2Q92539 896 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 CLUAP1Q96AJ1 413 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 DEFB129Q9H1M3 183 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 TSKSQ9UJT2 592 aa20.47■□□□□ 0.87
CCND1-205ENST00000542367 PA2G4Q9UQ80 394 aaKnown RBP20.47■□□□□ 0.87
CCND1-205ENST00000542367 PAPPA2Q9BXP8 1791 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 CIAO1O76071 339 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 SLC10A3P09131 477 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 SLC5A1P13866 664 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 CEP126Q9P2H0 1117 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 AOX1Q06278 1338 aa20.46■□□□□ 0.87
CCND1-205ENST00000542367 CA12O43570 354 aa20.45■□□□□ 0.86
CCND1-205ENST00000542367 GRIK5Q16478 980 aa20.45■□□□□ 0.86
CCND1-205ENST00000542367 SERPINA10Q9UK55 444 aa20.45■□□□□ 0.86
CCND1-205ENST00000542367 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
CCND1-205ENST00000542367 PRKG1Q13976 671 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 RASAL3Q86YV0 1011 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 VEZTQ9HBM0 779 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 COPRSQ9NQ92 184 aa20.44■□□□□ 0.86
CCND1-205ENST00000542367 ECM29Q5VYK3 1845 aa20.43■□□□□ 0.86
CCND1-205ENST00000542367 CRKP46108 304 aa20.43■□□□□ 0.86
CCND1-205ENST00000542367 ARMC9Q7Z3E5 817 aa20.43■□□□□ 0.86
CCND1-205ENST00000542367 SRGAP3O43295 1099 aa20.42■□□□□ 0.86
CCND1-205ENST00000542367 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
CCND1-205ENST00000542367 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
CCND1-205ENST00000542367 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
CCND1-205ENST00000542367 TDRD3Q9H7E2 651 aaKnown RBP20.42■□□□□ 0.86
CCND1-205ENST00000542367 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
CCND1-205ENST00000542367 PPP2R3BQ9Y5P8 575 aa20.42■□□□□ 0.86
CCND1-205ENST00000542367 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
CCND1-205ENST00000542367 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms