RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MKRN3Q13064 507 aaKnown RBP25.17■■□□□ 1.62
DDX11-220ENST00000542244 DGKZQ13574 1117 aa25.17■■□□□ 1.62
DDX11-220ENST00000542244 CDCA7LQ96GN5 454 aa25.17■■□□□ 1.62
DDX11-220ENST00000542244 TTLL12Q14166 644 aaPredicted RBP25.16■■□□□ 1.62
DDX11-220ENST00000542244 TAF7LQ5H9L4 462 aa25.16■■□□□ 1.62
DDX11-220ENST00000542244 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
DDX11-220ENST00000542244 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
DDX11-220ENST00000542244 BICC1Q9H694 974 aaKnown RBP25.16■■□□□ 1.62
DDX11-220ENST00000542244 UTYO14607 1347 aa25.15■■□□□ 1.62
DDX11-220ENST00000542244 GYG1P46976 350 aa25.15■■□□□ 1.62
DDX11-220ENST00000542244 PTPN12Q05209 780 aaKnown RBP25.15■■□□□ 1.62
DDX11-220ENST00000542244 HDAC9Q9UKV0 1011 aa25.15■■□□□ 1.62
DDX11-220ENST00000542244 CLRN2A0PK11 232 aa25.14■■□□□ 1.62
DDX11-220ENST00000542244 CFAP100Q494V2 611 aa25.14■■□□□ 1.62
DDX11-220ENST00000542244 ZNF804AQ7Z570 1209 aa25.14■■□□□ 1.62
DDX11-220ENST00000542244 PRMT6Q96LA8 375 aaPredicted RBP25.14■■□□□ 1.62
DDX11-220ENST00000542244 SAGE1Q9NXZ1 904 aa25.14■■□□□ 1.62
DDX11-220ENST00000542244 RIPOR2Q9Y4F9 1068 aa25.14■■□□□ 1.62
DDX11-220ENST00000542244 SSC5DA1L4H1 1573 aa25.14■■□□□ 1.61
DDX11-220ENST00000542244 SLFN5Q08AF3 891 aa25.13■■□□□ 1.61
DDX11-220ENST00000542244 DLGAP5Q15398 846 aa25.13■■□□□ 1.61
DDX11-220ENST00000542244 GRIK5Q16478 980 aa25.13■■□□□ 1.61
DDX11-220ENST00000542244 LRRC24Q50LG9 513 aa25.13■■□□□ 1.61
DDX11-220ENST00000542244 KLHDC4Q8TBB5 520 aa25.13■■□□□ 1.61
DDX11-220ENST00000542244 FAM84BQ96KN1 310 aaPredicted RBP25.12■■□□□ 1.61
DDX11-220ENST00000542244 APOBEC3FQ8IUX4 373 aaKnown RBP25.11■■□□□ 1.61
DDX11-220ENST00000542244 MTMR14Q8NCE2 650 aa25.11■■□□□ 1.61
DDX11-220ENST00000542244 TDRD7Q8NHU6 1098 aaKnown RBP25.11■■□□□ 1.61
DDX11-220ENST00000542244 DEFB129Q9H1M3 183 aa25.11■■□□□ 1.61
DDX11-220ENST00000542244 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.11■■□□□ 1.61
DDX11-220ENST00000542244 SPDYE2BA6NHP3 402 aa25.1■■□□□ 1.61
DDX11-220ENST00000542244 TBC1D8O95759 1140 aa25.1■■□□□ 1.61
DDX11-220ENST00000542244 SPDYE6P0CI01 402 aa25.1■■□□□ 1.61
DDX11-220ENST00000542244 RABL6Q3YEC7 729 aaPredicted RBP25.1■■□□□ 1.61
DDX11-220ENST00000542244 IQSEC3Q9UPP2 1182 aaPredicted RBP25.1■■□□□ 1.61
DDX11-220ENST00000542244 LDLRAD1Q5T700 205 aa25.09■■□□□ 1.61
DDX11-220ENST00000542244 USP44Q9H0E7 712 aa25.09■■□□□ 1.61
DDX11-220ENST00000542244 R3HDMLQ9H3Y0 253 aa25.09■■□□□ 1.61
DDX11-220ENST00000542244 ANGEL1Q9UNK9 670 aaKnown RBP25.09■■□□□ 1.61
DDX11-220ENST00000542244 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
DDX11-220ENST00000542244 FAM205AQ6ZU69 1335 aa25.09■■□□□ 1.61
DDX11-220ENST00000542244 E9PSI1 815 aa25.08■■□□□ 1.61
DDX11-220ENST00000542244 MMP14P50281 582 aa25.08■■□□□ 1.61
DDX11-220ENST00000542244 UBE4AQ14139 1066 aa25.08■■□□□ 1.61
DDX11-220ENST00000542244 CLMNQ96JQ2 1002 aa25.08■■□□□ 1.61
DDX11-220ENST00000542244 HIBADHP31937 336 aaKnown RBP25.07■■□□□ 1.6
DDX11-220ENST00000542244 FKBP1AP62942 108 aaKnown RBP25.07■■□□□ 1.6
DDX11-220ENST00000542244 NBPF12Q5TAG4 269 aaPredicted RBP25.07■■□□□ 1.6
DDX11-220ENST00000542244 CDAN1Q8IWY9 1227 aa25.07■■□□□ 1.6
DDX11-220ENST00000542244 NF2P35240 595 aa25.06■■□□□ 1.6
DDX11-220ENST00000542244 VGLL2Q8N8G2 317 aa25.06■■□□□ 1.6
DDX11-220ENST00000542244 VEZTQ9HBM0 779 aa25.06■■□□□ 1.6
DDX11-220ENST00000542244 MFSD14BQ5SR56 506 aa25.05■■□□□ 1.6
DDX11-220ENST00000542244 ARMC9Q7Z3E5 817 aa25.05■■□□□ 1.6
DDX11-220ENST00000542244 FBXO33Q7Z6M2 555 aa25.05■■□□□ 1.6
DDX11-220ENST00000542244 TM4SF4P48230 202 aa25.04■■□□□ 1.6
DDX11-220ENST00000542244 RBM5P52756 815 aaKnown RBP eCLIP25.04■■□□□ 1.6
DDX11-220ENST00000542244 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
DDX11-220ENST00000542244 TTF2Q9UNY4 1162 aaKnown RBP25.04■■□□□ 1.6
DDX11-220ENST00000542244 PTPRCP08575 1304 aa25.04■■□□□ 1.6
DDX11-220ENST00000542244 RGS19P49795 217 aa25.03■■□□□ 1.6
DDX11-220ENST00000542244 SPRYD7Q5W111 196 aa25.03■■□□□ 1.6
DDX11-220ENST00000542244 TDRD3Q9H7E2 651 aaKnown RBP25.03■■□□□ 1.6
DDX11-220ENST00000542244 MROH5Q6ZUA9 1318 aa25.03■■□□□ 1.6
DDX11-220ENST00000542244 ECM29Q5VYK3 1845 aa25.02■■□□□ 1.6
DDX11-220ENST00000542244 RFX5P48382 616 aaPredicted RBP25.02■■□□□ 1.6
DDX11-220ENST00000542244 RASA3Q14644 834 aa25.02■■□□□ 1.6
DDX11-220ENST00000542244 METTL24Q5JXM2 366 aa25.02■■□□□ 1.6
DDX11-220ENST00000542244 REM2Q8IYK8 340 aaPredicted RBP25.02■■□□□ 1.6
DDX11-220ENST00000542244 ZNF296Q8WUU4 475 aaPredicted RBP25.02■■□□□ 1.6
DDX11-220ENST00000542244 ZNF70Q9UC06 446 aaPredicted RBP25.02■■□□□ 1.6
DDX11-220ENST00000542244 COL1A1P02452 1464 aaPredicted RBP25.02■■□□□ 1.6
DDX11-220ENST00000542244 GJA5P36382 358 aa25.01■■□□□ 1.59
DDX11-220ENST00000542244 BCAMP50895 628 aa25.01■■□□□ 1.59
DDX11-220ENST00000542244 CHAF1AQ13111 956 aaPredicted RBP25.01■■□□□ 1.59
DDX11-220ENST00000542244 USP2O75604 605 aaPredicted RBP25■■□□□ 1.59
DDX11-220ENST00000542244 MAP3K11Q16584 847 aa25■■□□□ 1.59
DDX11-220ENST00000542244 SPDYE2Q495Y8 402 aa25■■□□□ 1.59
DDX11-220ENST00000542244 PDE8BO95263 885 aa24.99■■□□□ 1.59
DDX11-220ENST00000542244 CTU1Q7Z7A3 348 aaKnown RBP24.99■■□□□ 1.59
DDX11-220ENST00000542244 DZIP1LQ8IYY4 767 aaKnown RBP24.99■■□□□ 1.59
DDX11-220ENST00000542244 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
DDX11-220ENST00000542244 FGFR2P21802 821 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 CRKP46108 304 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 SLC10A4Q96EP9 437 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 WNK4Q96J92 1243 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 TEPSINQ96N21 525 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 PPP2R3BQ9Y5P8 575 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 ARAP2Q8WZ64 1704 aa24.98■■□□□ 1.59
DDX11-220ENST00000542244 MYO1BO43795 1136 aa24.97■■□□□ 1.59
DDX11-220ENST00000542244 CACNB3P54284 484 aa24.97■■□□□ 1.59
DDX11-220ENST00000542244 SOX10P56693 466 aa24.97■■□□□ 1.59
DDX11-220ENST00000542244 MLLT1Q03111 559 aaPredicted RBP24.97■■□□□ 1.59
DDX11-220ENST00000542244 ALDH1L2Q3SY69 923 aa24.97■■□□□ 1.59
DDX11-220ENST00000542244 SERPINA10Q9UK55 444 aa24.97■■□□□ 1.59
DDX11-220ENST00000542244 NOB1Q9ULX3 412 aaKnown RBP24.97■■□□□ 1.59
DDX11-220ENST00000542244 TCP10L2B9ZVM9 353 aa24.96■■□□□ 1.59
DDX11-220ENST00000542244 GPR25O00155 361 aa24.96■■□□□ 1.59
DDX11-220ENST00000542244 IGF2BP3O00425 579 aaKnown RBP eCLIP24.96■■□□□ 1.59
DDX11-220ENST00000542244 ATG9AQ7Z3C6 839 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms