RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 ATF7IPQ6VMQ6 1270 aa27.59■■■□□ 2.01
C2CD3-216ENST00000541922 VGLL2Q8N8G2 317 aa27.59■■■□□ 2.01
C2CD3-216ENST00000541922 TDRD7Q8NHU6 1098 aaKnown RBP27.59■■■□□ 2.01
C2CD3-216ENST00000541922 AIDAQ96BJ3 306 aa27.59■■■□□ 2.01
C2CD3-216ENST00000541922 JAG2Q9Y219 1238 aa27.59■■■□□ 2.01
C2CD3-216ENST00000541922 TRIM27P14373 513 aa27.58■■■□□ 2.01
C2CD3-216ENST00000541922 PTPN12Q05209 780 aaKnown RBP27.58■■■□□ 2.01
C2CD3-216ENST00000541922 VPS37DQ86XT2 251 aa27.58■■■□□ 2.01
C2CD3-216ENST00000541922 ZBED9Q6R2W3 1325 aa27.58■■■□□ 2.01
C2CD3-216ENST00000541922 PCNTO95613 3336 aa27.57■■■□□ 2
C2CD3-216ENST00000541922 F8W031 263 aaPredicted RBP27.57■■■□□ 2
C2CD3-216ENST00000541922 MAP2K1Q02750 393 aaPredicted RBP27.57■■■□□ 2
C2CD3-216ENST00000541922 CAVIN4Q5BKX8 364 aa27.57■■■□□ 2
C2CD3-216ENST00000541922 WBP1LQ9NX94 342 aa27.57■■■□□ 2
C2CD3-216ENST00000541922 FAM205AQ6ZU69 1335 aa27.57■■■□□ 2
C2CD3-216ENST00000541922 THSD7BQ9C0I4 1608 aa27.56■■■□□ 2
C2CD3-216ENST00000541922 GNAI3P08754 354 aa27.56■■■□□ 2
C2CD3-216ENST00000541922 DLGAP5Q15398 846 aa27.56■■■□□ 2
C2CD3-216ENST00000541922 SCAF8Q9UPN6 1271 aaKnown RBP27.56■■■□□ 2
C2CD3-216ENST00000541922 FOXN1O15353 648 aa27.55■■■□□ 2
C2CD3-216ENST00000541922 PUM3Q15397 648 aaKnown RBP27.55■■■□□ 2
C2CD3-216ENST00000541922 FBXO33Q7Z6M2 555 aa27.55■■■□□ 2
C2CD3-216ENST00000541922 FBXO3Q9UK99 471 aa27.55■■■□□ 2
C2CD3-216ENST00000541922 IFIT1P09914 478 aaKnown RBP27.54■■■□□ 2
C2CD3-216ENST00000541922 MAP2K2P36507 400 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 MFSD14BQ5SR56 506 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 COL13A1Q5TAT6 717 aaPredicted RBP27.54■■■□□ 2
C2CD3-216ENST00000541922 ZKSCAN2Q63HK3 967 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 CLUAP1Q96AJ1 413 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 ZBED3Q96IU2 234 aaPredicted RBP27.54■■■□□ 2
C2CD3-216ENST00000541922 SIL1Q9H173 461 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 TNNQ9UQP3 1299 aa27.54■■■□□ 2
C2CD3-216ENST00000541922 AOC2O75106 756 aa27.53■■■□□ 2
C2CD3-216ENST00000541922 FRAT2O75474 233 aaPredicted RBP27.52■■■□□ 2
C2CD3-216ENST00000541922 CIAO1O76071 339 aa27.52■■■□□ 2
C2CD3-216ENST00000541922 FGFR2P21802 821 aa27.52■■■□□ 2
C2CD3-216ENST00000541922 RGMBQ6NW40 437 aa27.52■■■□□ 2
C2CD3-216ENST00000541922 ATG9AQ7Z3C6 839 aa27.52■■■□□ 2
C2CD3-216ENST00000541922 APOBEC3FQ8IUX4 373 aaKnown RBP27.52■■■□□ 2
C2CD3-216ENST00000541922 MTMR14Q8NCE2 650 aa27.52■■■□□ 2
C2CD3-216ENST00000541922 IQSEC3Q9UPP2 1182 aaPredicted RBP27.52■■■□□ 2
C2CD3-216ENST00000541922 SLC5A1P13866 664 aa27.51■■□□□ 1.99
C2CD3-216ENST00000541922 CTCFP49711 727 aaPredicted RBP27.51■■□□□ 1.99
C2CD3-216ENST00000541922 CFAP100Q494V2 611 aa27.51■■□□□ 1.99
C2CD3-216ENST00000541922 BEGAINQ9BUH8 593 aa27.51■■□□□ 1.99
C2CD3-216ENST00000541922 ECM29Q5VYK3 1845 aa27.51■■□□□ 1.99
C2CD3-216ENST00000541922 BCAMP50895 628 aa27.5■■□□□ 1.99
C2CD3-216ENST00000541922 PRAMEF18Q5VWM3 479 aa27.5■■□□□ 1.99
C2CD3-216ENST00000541922 CEP126Q9P2H0 1117 aa27.5■■□□□ 1.99
C2CD3-216ENST00000541922 ARAP2Q8WZ64 1704 aa27.5■■□□□ 1.99
C2CD3-216ENST00000541922 MYO1BO43795 1136 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 RBM5P52756 815 aaKnown RBP eCLIP27.49■■□□□ 1.99
C2CD3-216ENST00000541922 FKBP1BP68106 108 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 CHAF1AQ13111 956 aaPredicted RBP27.49■■□□□ 1.99
C2CD3-216ENST00000541922 IFFO2Q5TF58 517 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 LPIN2Q92539 896 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 COPRSQ9NQ92 184 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 TTF2Q9UNY4 1162 aaKnown RBP27.49■■□□□ 1.99
C2CD3-216ENST00000541922 PA2G4Q9UQ80 394 aaKnown RBP27.49■■□□□ 1.99
C2CD3-216ENST00000541922 PAPPA2Q9BXP8 1791 aa27.49■■□□□ 1.99
C2CD3-216ENST00000541922 NF2P35240 595 aa27.48■■□□□ 1.99
C2CD3-216ENST00000541922 IL15P40933 162 aaPredicted RBP27.48■■□□□ 1.99
C2CD3-216ENST00000541922 NOGQ13253 232 aa27.48■■□□□ 1.99
C2CD3-216ENST00000541922 PCDHAC2Q9Y5I4 1007 aa27.48■■□□□ 1.99
C2CD3-216ENST00000541922 SPDYE2BA6NHP3 402 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 SRGAP3O43295 1099 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 SPDYE6P0CI01 402 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 ZNF157P51786 506 aaPredicted RBP27.47■■□□□ 1.99
C2CD3-216ENST00000541922 TMEM57Q8N5G2 664 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 TBC1D22AQ8WUA7 517 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 CCDC102AQ96A19 550 aa27.47■■□□□ 1.99
C2CD3-216ENST00000541922 PRMT6Q96LA8 375 aaPredicted RBP27.47■■□□□ 1.99
C2CD3-216ENST00000541922 GNAI2P04899 355 aa27.46■■□□□ 1.99
C2CD3-216ENST00000541922 MTX1Q13505 466 aa27.46■■□□□ 1.99
C2CD3-216ENST00000541922 MYH13Q9UKX3 1938 aa27.45■■□□□ 1.99
C2CD3-216ENST00000541922 TTLL12Q14166 644 aaPredicted RBP27.45■■□□□ 1.98
C2CD3-216ENST00000541922 ATP2B3Q16720 1220 aa27.45■■□□□ 1.98
C2CD3-216ENST00000541922 PRDM10Q9NQV6 1147 aa27.45■■□□□ 1.98
C2CD3-216ENST00000541922 SERPINA10Q9UK55 444 aa27.45■■□□□ 1.98
C2CD3-216ENST00000541922 CLRN2A0PK11 232 aa27.44■■□□□ 1.98
C2CD3-216ENST00000541922 LBX1P52954 281 aa27.44■■□□□ 1.98
C2CD3-216ENST00000541922 FTSJ3Q8IY81 847 aaKnown RBP27.44■■□□□ 1.98
C2CD3-216ENST00000541922 COL1A1P02452 1464 aaPredicted RBP27.44■■□□□ 1.98
C2CD3-216ENST00000541922 FAM155AB1AL88 458 aaPredicted RBP27.43■■□□□ 1.98
C2CD3-216ENST00000541922 MOB2Q70IA6 237 aa27.43■■□□□ 1.98
C2CD3-216ENST00000541922 TNS4Q8IZW8 715 aa27.43■■□□□ 1.98
C2CD3-216ENST00000541922 DEFB129Q9H1M3 183 aa27.43■■□□□ 1.98
C2CD3-216ENST00000541922 VEZTQ9HBM0 779 aa27.43■■□□□ 1.98
C2CD3-216ENST00000541922 HSPA8P11142 646 aaKnown RBP27.42■■□□□ 1.98
C2CD3-216ENST00000541922 UBE2Q2LH0YL09 131 aa27.41■■□□□ 1.98
C2CD3-216ENST00000541922 SLC10A3P09131 477 aa27.41■■□□□ 1.98
C2CD3-216ENST00000541922 GRIK5Q16478 980 aa27.41■■□□□ 1.98
C2CD3-216ENST00000541922 DZIP1LQ8IYY4 767 aaKnown RBP27.41■■□□□ 1.98
C2CD3-216ENST00000541922 ZIC5Q96T25 663 aa27.41■■□□□ 1.98
C2CD3-216ENST00000541922 PPP2R3BQ9Y5P8 575 aa27.41■■□□□ 1.98
C2CD3-216ENST00000541922 CRKP46108 304 aa27.4■■□□□ 1.98
C2CD3-216ENST00000541922 GNL3LQ9NVN8 582 aaKnown RBP27.4■■□□□ 1.98
C2CD3-216ENST00000541922 AOX1Q06278 1338 aa27.4■■□□□ 1.98
C2CD3-216ENST00000541922 CA12O43570 354 aa27.39■■□□□ 1.98
C2CD3-216ENST00000541922 HDLBPQ00341 1268 aaKnown RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms