RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 DOK7Q18PE1 504 aa25.72■■□□□ 1.71
MSRB3-211ENST00000541897 UQCRFS1P1P0C7P4 283 aa25.71■■□□□ 1.71
MSRB3-211ENST00000541897 PHKA1P46020 1223 aa25.71■■□□□ 1.71
MSRB3-211ENST00000541897 DBNDD1Q9H9R9 158 aa25.71■■□□□ 1.71
MSRB3-211ENST00000541897 PDS5AQ29RF7 1337 aaKnown RBP25.7■■□□□ 1.71
MSRB3-211ENST00000541897 SALL3Q9BXA9 1300 aa25.7■■□□□ 1.71
MSRB3-211ENST00000541897 JMYQ8N9B5 988 aa25.7■■□□□ 1.7
MSRB3-211ENST00000541897 LNPKQ9C0E8 428 aa25.7■■□□□ 1.7
MSRB3-211ENST00000541897 YDJCA8MPS7 323 aa25.69■■□□□ 1.7
MSRB3-211ENST00000541897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.69■■□□□ 1.7
MSRB3-211ENST00000541897 GPATCH3Q96I76 525 aa25.69■■□□□ 1.7
MSRB3-211ENST00000541897 TTC41PQ6P2S7 1318 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 FAM205AQ6ZU69 1335 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 POTEIP0CG38 1075 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 POTEJP0CG39 1038 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 TTC39AQ5SRH9 613 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 DENND2AQ9ULE3 1009 aa25.68■■□□□ 1.7
MSRB3-211ENST00000541897 STRIP1Q5VSL9 837 aa25.67■■□□□ 1.7
MSRB3-211ENST00000541897 ECHDC1Q9NTX5 307 aa25.67■■□□□ 1.7
MSRB3-211ENST00000541897 STAP2Q9UGK3 403 aa25.67■■□□□ 1.7
MSRB3-211ENST00000541897 SCN4AP35499 1836 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 USP17L3A6NCW0 530 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 USP17L4A6NCW7 530 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 ATP5JP18859 108 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 MX1P20591 662 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 EIF6P56537 245 aaKnown RBP25.66■■□□□ 1.7
MSRB3-211ENST00000541897 USP17L1Q7RTZ2 530 aa25.66■■□□□ 1.7
MSRB3-211ENST00000541897 FRAT2O75474 233 aaPredicted RBP25.65■■□□□ 1.7
MSRB3-211ENST00000541897 FKBP1AP62942 108 aaKnown RBP25.65■■□□□ 1.7
MSRB3-211ENST00000541897 OSBPL3Q9H4L5 887 aa25.65■■□□□ 1.7
MSRB3-211ENST00000541897 PSME4Q14997 1843 aa25.65■■□□□ 1.7
MSRB3-211ENST00000541897 AOX1Q06278 1338 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 CXCL9Q07325 125 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 RASGRF1Q13972 1273 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 TNIP1Q15025 636 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 CIAPIN1Q6FI81 312 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 CHADLQ6NUI6 762 aa25.64■■□□□ 1.7
MSRB3-211ENST00000541897 ZNF541Q9H0D2 1346 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 ERC2O15083 957 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 VIL1P09327 827 aaKnown RBP25.63■■□□□ 1.69
MSRB3-211ENST00000541897 MCAMP43121 646 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 PDE1AP54750 535 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 TTLL5Q6EMB2 1281 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 WDR66Q8TBY9 1149 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 OTUD7AQ8TE49 926 aaPredicted RBP25.63■■□□□ 1.69
MSRB3-211ENST00000541897 TBC1D22AQ8WUA7 517 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 HMG20BQ9P0W2 317 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 GTF3C3Q9Y5Q9 886 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 SALL1Q9NSC2 1324 aa25.63■■□□□ 1.69
MSRB3-211ENST00000541897 COL1A1P02452 1464 aaPredicted RBP25.62■■□□□ 1.69
MSRB3-211ENST00000541897 GTF2IP78347 998 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 DACT2Q5SW24 774 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 SPATA5Q8NB90 893 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 BCL11AQ9H165 835 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 KCNQ5Q9NR82 932 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 IQSEC3Q9UPP2 1182 aaPredicted RBP25.62■■□□□ 1.69
MSRB3-211ENST00000541897 SCN9AQ15858 1988 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 MYO3BQ8WXR4 1341 aa25.62■■□□□ 1.69
MSRB3-211ENST00000541897 IGSF3O75054 1194 aa25.61■■□□□ 1.69
MSRB3-211ENST00000541897 GLRX3O76003 335 aaKnown RBP25.61■■□□□ 1.69
MSRB3-211ENST00000541897 PDE4AP27815 886 aa25.61■■□□□ 1.69
MSRB3-211ENST00000541897 SCARF1Q14162 830 aa25.61■■□□□ 1.69
MSRB3-211ENST00000541897 PLEKHM2Q8IWE5 1019 aa25.61■■□□□ 1.69
MSRB3-211ENST00000541897 GPC2Q8N158 579 aa25.61■■□□□ 1.69
MSRB3-211ENST00000541897 ZNF646O15015 1829 aaPredicted RBP25.6■■□□□ 1.69
MSRB3-211ENST00000541897 PSMD14O00487 310 aa25.6■■□□□ 1.69
MSRB3-211ENST00000541897 RAD17O75943 681 aa25.6■■□□□ 1.69
MSRB3-211ENST00000541897 PI4K2BQ8TCG2 481 aa25.6■■□□□ 1.69
MSRB3-211ENST00000541897 L3MBTL3Q96JM7 780 aaPredicted RBP25.6■■□□□ 1.69
MSRB3-211ENST00000541897 SUGT1Q9Y2Z0 365 aa25.6■■□□□ 1.69
MSRB3-211ENST00000541897 IQCA1LA6NCM1 817 aa25.59■■□□□ 1.69
MSRB3-211ENST00000541897 RPS12P25398 132 aaKnown RBP25.59■■□□□ 1.69
MSRB3-211ENST00000541897 RSBN1LQ6PCB5 846 aaPredicted RBP25.59■■□□□ 1.69
MSRB3-211ENST00000541897 ZGPATQ8N5A5 531 aaKnown RBP25.59■■□□□ 1.69
MSRB3-211ENST00000541897 AGBL3Q8NEM8 1001 aa25.59■■□□□ 1.69
MSRB3-211ENST00000541897 HAUS7Q99871 368 aa25.59■■□□□ 1.69
MSRB3-211ENST00000541897 TAF1DQ9H5J8 278 aaPredicted RBP25.59■■□□□ 1.69
MSRB3-211ENST00000541897 MYH13Q9UKX3 1938 aa25.59■■□□□ 1.69
MSRB3-211ENST00000541897 MMP14P50281 582 aa25.58■■□□□ 1.69
MSRB3-211ENST00000541897 AKAP11Q9UKA4 1901 aa25.58■■□□□ 1.69
MSRB3-211ENST00000541897 CHAF1AQ13111 956 aaPredicted RBP25.57■■□□□ 1.68
MSRB3-211ENST00000541897 COL13A1Q5TAT6 717 aaPredicted RBP25.57■■□□□ 1.68
MSRB3-211ENST00000541897 GMLQ99445 158 aa25.57■■□□□ 1.68
MSRB3-211ENST00000541897 MFSD14BQ5SR56 506 aa25.56■■□□□ 1.68
MSRB3-211ENST00000541897 DPF2Q92785 391 aa25.56■■□□□ 1.68
MSRB3-211ENST00000541897 BOLA2Q9H3K6 86 aa25.56■■□□□ 1.68
MSRB3-211ENST00000541897 CYP2E1P05181 493 aaPredicted RBP25.55■■□□□ 1.68
MSRB3-211ENST00000541897 ZAP70P43403 619 aa25.55■■□□□ 1.68
MSRB3-211ENST00000541897 TTF1Q15361 905 aaPredicted RBP25.55■■□□□ 1.68
MSRB3-211ENST00000541897 EAPPQ56P03 285 aaPredicted RBP25.55■■□□□ 1.68
MSRB3-211ENST00000541897 PI16Q6UXB8 463 aa25.55■■□□□ 1.68
MSRB3-211ENST00000541897 LDHDQ86WU2 507 aa25.55■■□□□ 1.68
MSRB3-211ENST00000541897 FBXW7Q969H0 707 aa25.55■■□□□ 1.68
MSRB3-211ENST00000541897 TSHZ3Q63HK5 1081 aa25.54■■□□□ 1.68
MSRB3-211ENST00000541897 SPTY2D1Q68D10 685 aaPredicted RBP25.54■■□□□ 1.68
MSRB3-211ENST00000541897 CERS5Q8N5B7 392 aa25.54■■□□□ 1.68
MSRB3-211ENST00000541897 SNRKQ9NRH2 765 aa25.54■■□□□ 1.68
MSRB3-211ENST00000541897 HACL1Q9UJ83 578 aa25.54■■□□□ 1.68
MSRB3-211ENST00000541897 TMED8Q6PL24 325 aaPredicted RBP25.53■■□□□ 1.68
MSRB3-211ENST00000541897 CREBZFQ9NS37 354 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms