RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 CHPF2Q9P2E5 772 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 DBF4Q9UBU7 674 aaPredicted RBP10.14□□□□□ -0.79
LMO3-226ENST00000541589 ZNRF3Q9ULT6 936 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 TBC1D12O60347 775 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 TRPA1O75762 1119 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 GTF2E1P29083 439 aaPredicted RBP10.13□□□□□ -0.79
LMO3-226ENST00000541589 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
LMO3-226ENST00000541589 NUTM1Q86Y26 1132 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 MEIS3Q99687 375 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
LMO3-226ENST00000541589 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 GNAI3P08754 354 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 SNRPA1P09661 255 aaKnown RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 NUCB1Q02818 461 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 HABP4Q5JVS0 413 aaKnown RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 RPGRQ92834 1020 aaKnown RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 RTFDC1Q9BY42 306 aaPredicted RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 NYXQ9GZU5 481 aa10.12□□□□□ -0.79
LMO3-226ENST00000541589 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 IBTKQ9P2D0 1353 aaPredicted RBP10.12□□□□□ -0.79
LMO3-226ENST00000541589 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
LMO3-226ENST00000541589 CEP85Q6P2H3 762 aa10.11□□□□□ -0.79
LMO3-226ENST00000541589 RBM17Q96I25 401 aaKnown RBP10.11□□□□□ -0.79
LMO3-226ENST00000541589 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
LMO3-226ENST00000541589 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
LMO3-226ENST00000541589 SHTN1A0MZ66 631 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 GNAI2P04899 355 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 SLC10A3P09131 477 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 PKN2Q16513 984 aaKnown RBP10.1□□□□□ -0.79
LMO3-226ENST00000541589 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 GBA2Q9HCG7 927 aaPredicted RBP10.1□□□□□ -0.79
LMO3-226ENST00000541589 CNOT7Q9UIV1 285 aaKnown RBP10.1□□□□□ -0.79
LMO3-226ENST00000541589 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 ERVV-1B6SEH8 477 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 HMMRO75330 724 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 ZNF157P51786 506 aaPredicted RBP10.1□□□□□ -0.79
LMO3-226ENST00000541589 KIAA2012Q0VF49 1180 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 SUPT20HQ8NEM7 779 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 SRCIN1Q9C0H9 1055 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 DCTPP1Q9H773 170 aa10.1□□□□□ -0.79
LMO3-226ENST00000541589 MKI67P46013 3256 aaKnown RBP10.09□□□□□ -0.79
LMO3-226ENST00000541589 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 YDJCA8MPS7 323 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 RAD17O75943 681 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 DDX58O95786 925 aaKnown RBP10.09□□□□□ -0.79
LMO3-226ENST00000541589 ANP32AP39687 249 aaKnown RBP10.09□□□□□ -0.79
LMO3-226ENST00000541589 TNIP1Q15025 636 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 C2orf69Q8N8R5 385 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
LMO3-226ENST00000541589 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 PI4KAP2A4QPH2 592 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 H7C1D1 291 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 NTSR2O95665 410 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 ANXA1P04083 346 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 PDIA6Q15084 440 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 BEND3Q5T5X7 828 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 SUSD4Q5VX71 490 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 KSR2Q6VAB6 950 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 PI4KAP1Q8N8J0 262 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 DPF2Q92785 391 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
LMO3-226ENST00000541589 MAP3K15Q6ZN16 1313 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 EGFRP00533 1210 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
LMO3-226ENST00000541589 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 USP44Q9H0E7 712 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 AKAP11Q9UKA4 1901 aa10.07□□□□□ -0.8
LMO3-226ENST00000541589 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
LMO3-226ENST00000541589 ATP8B2P98198 1209 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 SLC10A5Q5PT55 438 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 ZNF296Q8WUU4 475 aaPredicted RBP10.06□□□□□ -0.8
LMO3-226ENST00000541589 MAP3K2Q9Y2U5 619 aa10.06□□□□□ -0.8
LMO3-226ENST00000541589 BBOX1O75936 387 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 GPTP24298 496 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 CAMK2BQ13554 666 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
LMO3-226ENST00000541589 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
LMO3-226ENST00000541589 DPP8Q6V1X1 898 aaPredicted RBP10.05□□□□□ -0.8
LMO3-226ENST00000541589 TTLL7Q6ZT98 887 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 MPNDQ8N594 471 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 TMX4Q9H1E5 349 aaPredicted RBP10.05□□□□□ -0.8
LMO3-226ENST00000541589 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms