RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RAD17O75943 681 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
CHFR-219ENST00000541341 SDSP20132 328 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 CXCL9Q07325 125 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 CST9Q5W186 159 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 DLK2Q6UY11 383 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
CHFR-219ENST00000541341 DUOX1Q9NRD9 1551 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CHFR-219ENST00000541341 NEK4P51957 841 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
CHFR-219ENST00000541341 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 FEZ1Q99689 392 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
CHFR-219ENST00000541341 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
CHFR-219ENST00000541341 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
CHFR-219ENST00000541341 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 AKAP11Q9UKA4 1901 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 SYCE3A1L190 88 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
CHFR-219ENST00000541341 MX1P20591 662 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 UBE2HP62256 183 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 FLIIQ13045 1269 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 G2E3Q7L622 706 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
CHFR-219ENST00000541341 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
CHFR-219ENST00000541341 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
CHFR-219ENST00000541341 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
CHFR-219ENST00000541341 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
CHFR-219ENST00000541341 GNAI2P04899 355 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 HSP90AB4PQ58FF6 505 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
CHFR-219ENST00000541341 CREBRFQ8IUR6 639 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 MPNDQ8N594 471 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 GPT2Q8TD30 523 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
CHFR-219ENST00000541341 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
CHFR-219ENST00000541341 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
CHFR-219ENST00000541341 MYH3P11055 1940 aa12.34□□□□□ -0.43
CHFR-219ENST00000541341 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
CHFR-219ENST00000541341 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHFR-219ENST00000541341 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
CHFR-219ENST00000541341 TRPM4Q8TD43 1214 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 ABHD8Q96I13 439 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 ESYT1Q9BSJ8 1104 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
CHFR-219ENST00000541341 CCDC85CA6NKD9 419 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 YDJCA8MPS7 323 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
CHFR-219ENST00000541341 HIRAP54198 1017 aaPredicted RBP12.32□□□□□ -0.44
CHFR-219ENST00000541341 PDE1AP54750 535 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 TLL2Q9Y6L7 1015 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
CHFR-219ENST00000541341 PDCP20941 246 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 ECE1P42892 770 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 GRAPQ13588 217 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 CELF1Q92879 486 aaKnown RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
CHFR-219ENST00000541341 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 CNOT7Q9UIV1 285 aaKnown RBP12.31□□□□□ -0.44
CHFR-219ENST00000541341 PSME4Q14997 1843 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms