RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PDE8AO60658 829 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 STK3Q13188 491 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 EAF2Q96CJ1 260 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
SFSWAP-210ENST00000541286 GJB2P29033 226 aa16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 RAD50Q92878 1312 aa16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 UTP14CQ5TAP6 766 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 PYCARDQ9ULZ3 195 aa16.93■□□□□ 0.3
SFSWAP-210ENST00000541286 ZSCAN22P10073 491 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 ADORA1P30542 326 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 MCM5P33992 734 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 KLRK1P26718 216 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 PCNTO95613 3336 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
SFSWAP-210ENST00000541286 CAMK4Q16566 473 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 BCORQ6W2J9 1755 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 CSF1RP07333 972 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 ADRA2BP18089 450 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 FOSBP53539 338 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 ERICH4A6NGS2 130 aa16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-210ENST00000541286 MTX1Q13505 466 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 CYP46A1Q9Y6A2 500 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 SCN7AQ01118 1682 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
SFSWAP-210ENST00000541286 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 COL9A3Q14050 684 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 ZNF592Q92610 1267 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 ZNF622Q969S3 477 aaKnown RBP eCLIP16.89■□□□□ 0.293e-7■□□□□ 10.5
SFSWAP-210ENST00000541286 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 ZNF831Q5JPB2 1677 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 F13A1P00488 732 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 PDIA4P13667 645 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 CCDC183Q5T5S1 534 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 TMEM51Q9NW97 253 aa16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-210ENST00000541286 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 SPEF2Q9C093 1822 aa16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 GTPBP4Q9BZE4 634 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-210ENST00000541286 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 C16orf45Q96MC5 204 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 CDHR2Q9BYE9 1310 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 EYA2O00167 538 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 AP5Z1O43299 807 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 COPRSQ9NQ92 184 aa16.87■□□□□ 0.29
SFSWAP-210ENST00000541286 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 CCDC152Q4G0S7 254 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 TXNRD3Q86VQ6 643 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 CDK11BP21127 795 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 ME3Q16798 604 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 CKAP2LQ8IYA6 745 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 TTC14Q96N46 770 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
SFSWAP-210ENST00000541286 UBE2HP62256 183 aa16.85■□□□□ 0.29
SFSWAP-210ENST00000541286 CEBPZQ03701 1054 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-210ENST00000541286 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms