RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ELP3Q9H9T3 547 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 TMEM63CQ9P1W3 806 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 TRIM33Q9UPN9 1127 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
SUDS3-202ENST00000541280 CEP162Q5TB80 1403 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
SUDS3-202ENST00000541280 PDGFAP04085 211 aa8.93□□□□□ -0.98
SUDS3-202ENST00000541280 MZF1P28698 734 aaPredicted RBP8.93□□□□□ -0.98
SUDS3-202ENST00000541280 GDF6Q6KF10 455 aaPredicted RBP8.93□□□□□ -0.98
SUDS3-202ENST00000541280 CFDP1Q9UEE9 299 aaPredicted RBP8.93□□□□□ -0.98
SUDS3-202ENST00000541280 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
SUDS3-202ENST00000541280 TSPOAP1O95153 1857 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 MPSTP25325 297 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 EIF1AXP47813 144 aaKnown RBP8.92□□□□□ -0.98
SUDS3-202ENST00000541280 ATP11AP98196 1134 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 SETDB1Q15047 1291 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 ALKBH2Q6NS38 261 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 CEP120Q8N960 986 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 WFDC12Q8WWY7 111 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 EDEM1Q92611 657 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 SPACA7Q96KW9 195 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 USTQ9Y2C2 406 aa8.92□□□□□ -0.98
SUDS3-202ENST00000541280 ADGRL1O94910 1474 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 POGZQ7Z3K3 1410 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
SUDS3-202ENST00000541280 NOS3P29474 1203 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 ZNF438Q7Z4V0 828 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 TMEM130Q8N3G9 435 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 AFAP1Q8N556 730 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 MRPL18Q9H0U6 180 aaKnown RBP8.91□□□□□ -0.98
SUDS3-202ENST00000541280 SALL4Q9UJQ4 1053 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 PPME1Q9Y570 386 aa8.91□□□□□ -0.98
SUDS3-202ENST00000541280 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 SMNDC1O75940 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
SUDS3-202ENST00000541280 PCSK2P16519 638 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 PBX4Q9BYU1 374 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 GGNBP2Q9H3C7 697 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 CNTN3Q9P232 1028 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 MTMR7Q9Y216 660 aa8.9□□□□□ -0.98
SUDS3-202ENST00000541280 TM4SF5O14894 197 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 DNM1Q05193 864 aaKnown RBP8.89□□□□□ -0.99
SUDS3-202ENST00000541280 SF3B2Q13435 895 aaKnown RBP8.89□□□□□ -0.99
SUDS3-202ENST00000541280 XP32Q5T750 250 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 CEP135Q66GS9 1140 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 Q6ZS46 218 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 Q8N3U1 123 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 TP53INP1Q96A56 240 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 RASSF4Q9H2L5 321 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
SUDS3-202ENST00000541280 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
SUDS3-202ENST00000541280 CFAP74Q9C0B2 1584 aa8.88□□□□□ -0.99
SUDS3-202ENST00000541280 IREB2P48200 963 aaKnown RBP8.88□□□□□ -0.99
SUDS3-202ENST00000541280 DZIP1LQ8IYY4 767 aaKnown RBP8.88□□□□□ -0.99
SUDS3-202ENST00000541280 ADAM19Q9H013 955 aa8.88□□□□□ -0.99
SUDS3-202ENST00000541280 KIF14Q15058 1648 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 ARHGAP5Q13017 1502 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
SUDS3-202ENST00000541280 FAM13AO94988 1023 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 CDC27P30260 824 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 PRSS36Q5K4E3 855 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 C1orf127Q8N9H9 656 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 MEGF10Q96KG7 1140 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 CHRDQ9H2X0 955 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 AKTIPQ9H8T0 292 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 ATP10AO60312 1499 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 PLEKHH2Q8IVE3 1493 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 VPS8Q8N3P4 1428 aa8.87□□□□□ -0.99
SUDS3-202ENST00000541280 GPATCH8Q9UKJ3 1502 aaKnown RBP8.86□□□□□ -0.99
SUDS3-202ENST00000541280 NFKBIEO00221 500 aa8.86□□□□□ -0.99
SUDS3-202ENST00000541280 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
SUDS3-202ENST00000541280 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
SUDS3-202ENST00000541280 ZMYM1Q5SVZ6 1142 aa8.86□□□□□ -0.99
SUDS3-202ENST00000541280 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
SUDS3-202ENST00000541280 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
SUDS3-202ENST00000541280 POLIQ9UNA4 740 aa8.86□□□□□ -0.99
SUDS3-202ENST00000541280 SPAG9O60271 1321 aaKnown RBP8.85□□□□□ -0.99
SUDS3-202ENST00000541280 MLH3Q9UHC1 1453 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 CARNS1A5YM72 827 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 PTPRAP18433 802 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 CES1P23141 567 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 USP5P45974 858 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 HNRNPMP52272 730 aaKnown RBP eCLIP8.85□□□□□ -0.99
SUDS3-202ENST00000541280 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
SUDS3-202ENST00000541280 EHHADHQ08426 723 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
SUDS3-202ENST00000541280 PCF11O94913 1555 aaKnown RBP8.85□□□□□ -0.99
SUDS3-202ENST00000541280 TTC37Q6PGP7 1564 aa8.85□□□□□ -0.99
SUDS3-202ENST00000541280 A6NHS1 94 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 FZD6O60353 706 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 TSPY4P0CV99 314 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 TSPY10P0CW01 314 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 C9orf84Q5VXU9 1444 aa8.84□□□□□ -0.99
SUDS3-202ENST00000541280 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms