RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CCDC102AQ96A19 550 aa26.3■■□□□ 1.8
CHFR-217ENST00000540537 FAM205AQ6ZU69 1335 aa26.3■■□□□ 1.8
CHFR-217ENST00000540537 FAM155AB1AL88 458 aaPredicted RBP26.29■■□□□ 1.8
CHFR-217ENST00000540537 CA12O43570 354 aa26.29■■□□□ 1.8
CHFR-217ENST00000540537 HIBADHP31937 336 aaKnown RBP26.29■■□□□ 1.8
CHFR-217ENST00000540537 METTL24Q5JXM2 366 aa26.29■■□□□ 1.8
CHFR-217ENST00000540537 MTMR14Q8NCE2 650 aa26.29■■□□□ 1.8
CHFR-217ENST00000540537 TDRD7Q8NHU6 1098 aaKnown RBP26.29■■□□□ 1.8
CHFR-217ENST00000540537 FAM84BQ96KN1 310 aaPredicted RBP26.29■■□□□ 1.8
CHFR-217ENST00000540537 SCAF8Q9UPN6 1271 aaKnown RBP26.29■■□□□ 1.8
CHFR-217ENST00000540537 GYG1P46976 350 aa26.28■■□□□ 1.8
CHFR-217ENST00000540537 ZNF157P51786 506 aaPredicted RBP26.28■■□□□ 1.8
CHFR-217ENST00000540537 APOBEC3FQ8IUX4 373 aaKnown RBP26.28■■□□□ 1.8
CHFR-217ENST00000540537 KIF16BQ96L93 1317 aa26.28■■□□□ 1.8
CHFR-217ENST00000540537 DLGAP5Q15398 846 aa26.27■■□□□ 1.8
CHFR-217ENST00000540537 VGLL2Q8N8G2 317 aa26.27■■□□□ 1.8
CHFR-217ENST00000540537 JAG2Q9Y219 1238 aa26.27■■□□□ 1.8
CHFR-217ENST00000540537 ECM29Q5VYK3 1845 aa26.27■■□□□ 1.8
CHFR-217ENST00000540537 PDE8BO95263 885 aa26.26■■□□□ 1.79
CHFR-217ENST00000540537 SLC10A3P09131 477 aa26.26■■□□□ 1.79
CHFR-217ENST00000540537 UBTFL1P0CB47 393 aaPredicted RBP26.26■■□□□ 1.79
CHFR-217ENST00000540537 RFX5P48382 616 aaPredicted RBP26.26■■□□□ 1.79
CHFR-217ENST00000540537 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
CHFR-217ENST00000540537 KLHDC4Q8TBB5 520 aa26.26■■□□□ 1.79
CHFR-217ENST00000540537 ARHGAP45Q92619 1136 aa26.26■■□□□ 1.79
CHFR-217ENST00000540537 ZIC5Q96T25 663 aa26.26■■□□□ 1.79
CHFR-217ENST00000540537 COL1A1P02452 1464 aaPredicted RBP26.25■■□□□ 1.79
CHFR-217ENST00000540537 F8W031 263 aaPredicted RBP26.25■■□□□ 1.79
CHFR-217ENST00000540537 PRAMEF18Q5VWM3 479 aa26.25■■□□□ 1.79
CHFR-217ENST00000540537 FBXO33Q7Z6M2 555 aa26.25■■□□□ 1.79
CHFR-217ENST00000540537 MIER1Q8N108 512 aa26.25■■□□□ 1.79
CHFR-217ENST00000540537 HDAC5Q9UQL6 1122 aa26.25■■□□□ 1.79
CHFR-217ENST00000540537 ARAP2Q8WZ64 1704 aa26.25■■□□□ 1.79
CHFR-217ENST00000540537 NF2P35240 595 aa26.24■■□□□ 1.79
CHFR-217ENST00000540537 CFAP100Q494V2 611 aa26.24■■□□□ 1.79
CHFR-217ENST00000540537 PTPN12Q05209 780 aaKnown RBP26.23■■□□□ 1.79
CHFR-217ENST00000540537 MFSD14BQ5SR56 506 aa26.23■■□□□ 1.79
CHFR-217ENST00000540537 VPS37DQ86XT2 251 aa26.23■■□□□ 1.79
CHFR-217ENST00000540537 SPDYE2BA6NHP3 402 aa26.22■■□□□ 1.79
CHFR-217ENST00000540537 EYA2O00167 538 aa26.22■■□□□ 1.79
CHFR-217ENST00000540537 SPDYE6P0CI01 402 aa26.22■■□□□ 1.79
CHFR-217ENST00000540537 CAVIN4Q5BKX8 364 aa26.22■■□□□ 1.79
CHFR-217ENST00000540537 MYO1BO43795 1136 aa26.21■■□□□ 1.79
CHFR-217ENST00000540537 KIF23Q02241 960 aaPredicted RBP26.21■■□□□ 1.79
CHFR-217ENST00000540537 PUM3Q15397 648 aaKnown RBP26.21■■□□□ 1.79
CHFR-217ENST00000540537 RASAL3Q86YV0 1011 aa26.21■■□□□ 1.79
CHFR-217ENST00000540537 FBXO3Q9UK99 471 aa26.21■■□□□ 1.79
CHFR-217ENST00000540537 PCDHAC2Q9Y5I4 1007 aa26.21■■□□□ 1.79
CHFR-217ENST00000540537 FGFR2P21802 821 aa26.2■■□□□ 1.78
CHFR-217ENST00000540537 MOB2Q70IA6 237 aa26.2■■□□□ 1.78
CHFR-217ENST00000540537 TSKSQ9UJT2 592 aa26.2■■□□□ 1.78
CHFR-217ENST00000540537 PPP2R3BQ9Y5P8 575 aa26.2■■□□□ 1.78
CHFR-217ENST00000540537 IFIT1P09914 478 aaKnown RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 TTLL12Q14166 644 aaPredicted RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 INTS3Q68E01 1043 aaKnown RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 PRMT6Q96LA8 375 aaPredicted RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 DEFB129Q9H1M3 183 aa26.19■■□□□ 1.78
CHFR-217ENST00000540537 SERPINA10Q9UK55 444 aa26.19■■□□□ 1.78
CHFR-217ENST00000540537 TTF2Q9UNY4 1162 aaKnown RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 LRRFIP2Q9Y608 721 aaKnown RBP26.19■■□□□ 1.78
CHFR-217ENST00000540537 UBE2Q2LH0YL09 131 aa26.18■■□□□ 1.78
CHFR-217ENST00000540537 IPO8O15397 1037 aaKnown RBP26.18■■□□□ 1.78
CHFR-217ENST00000540537 ATG9AQ7Z3C6 839 aa26.18■■□□□ 1.78
CHFR-217ENST00000540537 TBC1D22AQ8WUA7 517 aa26.18■■□□□ 1.78
CHFR-217ENST00000540537 MEIS3Q99687 375 aa26.18■■□□□ 1.78
CHFR-217ENST00000540537 AKAP11Q9UKA4 1901 aa26.18■■□□□ 1.78
CHFR-217ENST00000540537 CAPN15O75808 1086 aa26.17■■□□□ 1.78
CHFR-217ENST00000540537 CIAO1O76071 339 aa26.17■■□□□ 1.78
CHFR-217ENST00000540537 RBM5P52756 815 aaKnown RBP eCLIP26.17■■□□□ 1.78
CHFR-217ENST00000540537 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
CHFR-217ENST00000540537 REM2Q8IYK8 340 aaPredicted RBP26.17■■□□□ 1.78
CHFR-217ENST00000540537 SAGE1Q9NXZ1 904 aa26.17■■□□□ 1.78
CHFR-217ENST00000540537 IQSEC3Q9UPP2 1182 aaPredicted RBP26.17■■□□□ 1.78
CHFR-217ENST00000540537 FRAT2O75474 233 aaPredicted RBP26.16■■□□□ 1.78
CHFR-217ENST00000540537 BCAMP50895 628 aa26.16■■□□□ 1.78
CHFR-217ENST00000540537 ARMC9Q7Z3E5 817 aa26.16■■□□□ 1.78
CHFR-217ENST00000540537 LPIN2Q92539 896 aa26.16■■□□□ 1.78
CHFR-217ENST00000540537 CLRN2A0PK11 232 aa26.15■■□□□ 1.78
CHFR-217ENST00000540537 GNAI3P08754 354 aa26.15■■□□□ 1.78
CHFR-217ENST00000540537 SLC5A1P13866 664 aa26.15■■□□□ 1.78
CHFR-217ENST00000540537 CHAF1AQ13111 956 aaPredicted RBP26.15■■□□□ 1.78
CHFR-217ENST00000540537 CSRNP1Q96S65 589 aa26.15■■□□□ 1.78
CHFR-217ENST00000540537 VEZTQ9HBM0 779 aa26.15■■□□□ 1.78
CHFR-217ENST00000540537 AOX1Q06278 1338 aa26.14■■□□□ 1.78
CHFR-217ENST00000540537 TRIM27P14373 513 aa26.14■■□□□ 1.78
CHFR-217ENST00000540537 SIL1Q9H173 461 aa26.14■■□□□ 1.78
CHFR-217ENST00000540537 CASP8AP2Q9UKL3 1982 aa26.14■■□□□ 1.77
CHFR-217ENST00000540537 BCAR3O75815 825 aa26.13■■□□□ 1.77
CHFR-217ENST00000540537 ATF7IPQ6VMQ6 1270 aa26.13■■□□□ 1.77
CHFR-217ENST00000540537 CEP126Q9P2H0 1117 aa26.13■■□□□ 1.77
CHFR-217ENST00000540537 MYH13Q9UKX3 1938 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 IL15P40933 162 aaPredicted RBP26.12■■□□□ 1.77
CHFR-217ENST00000540537 CRKP46108 304 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 HDLBPQ00341 1268 aaKnown RBP26.12■■□□□ 1.77
CHFR-217ENST00000540537 SPDYE2Q495Y8 402 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 LDLRAD1Q5T700 205 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 DZIP1LQ8IYY4 767 aaKnown RBP26.12■■□□□ 1.77
CHFR-217ENST00000540537 COPRSQ9NQ92 184 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 RNF186Q9NXI6 227 aa26.12■■□□□ 1.77
CHFR-217ENST00000540537 SSC5DA1L4H1 1573 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms