RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
UBE3B-212ENST00000540230 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.59
UBE3B-212ENST00000540230 SASH1O94885 1247 aa18.76■□□□□ 0.59
UBE3B-212ENST00000540230 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
UBE3B-212ENST00000540230 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
UBE3B-212ENST00000540230 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
UBE3B-212ENST00000540230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
UBE3B-212ENST00000540230 F8W031 263 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-212ENST00000540230 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-212ENST00000540230 ANGEL2Q5VTE6 544 aaKnown RBP18.75■□□□□ 0.59
UBE3B-212ENST00000540230 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
UBE3B-212ENST00000540230 PCDHAC2Q9Y5I4 1007 aa18.75■□□□□ 0.59
UBE3B-212ENST00000540230 CNTNAP1P78357 1384 aa18.75■□□□□ 0.59
UBE3B-212ENST00000540230 WNT10BO00744 389 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
UBE3B-212ENST00000540230 OGFOD1Q8N543 542 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 LPIN2Q92539 896 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
UBE3B-212ENST00000540230 ZNF408Q9H9D4 720 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 CEP126Q9P2H0 1117 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
UBE3B-212ENST00000540230 SLC5A1P13866 664 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 GRIK5Q16478 980 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 ATP2B3Q16720 1220 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
UBE3B-212ENST00000540230 MYH13Q9UKX3 1938 aa18.73■□□□□ 0.59
UBE3B-212ENST00000540230 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
UBE3B-212ENST00000540230 FKBP1AP62942 108 aaKnown RBP18.73■□□□□ 0.59
UBE3B-212ENST00000540230 CHAF1AQ13111 956 aaPredicted RBP18.73■□□□□ 0.59
UBE3B-212ENST00000540230 MFSD14BQ5SR56 506 aa18.73■□□□□ 0.59
UBE3B-212ENST00000540230 JMYQ8N9B5 988 aa18.73■□□□□ 0.59
UBE3B-212ENST00000540230 ZBED3Q96IU2 234 aaPredicted RBP18.73■□□□□ 0.59
UBE3B-212ENST00000540230 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
UBE3B-212ENST00000540230 ADORA1P30542 326 aa18.72■□□□□ 0.59
UBE3B-212ENST00000540230 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
UBE3B-212ENST00000540230 ABT1Q9ULW3 272 aaKnown RBP18.72■□□□□ 0.59
UBE3B-212ENST00000540230 AOX1Q06278 1338 aa18.71■□□□□ 0.59
UBE3B-212ENST00000540230 RASSF10A6NK89 507 aa18.71■□□□□ 0.59
UBE3B-212ENST00000540230 TFCP2Q12800 502 aa18.71■□□□□ 0.59
UBE3B-212ENST00000540230 POLA2Q14181 598 aa18.71■□□□□ 0.59
UBE3B-212ENST00000540230 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
UBE3B-212ENST00000540230 ECM29Q5VYK3 1845 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 SULF1Q8IWU6 871 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 SSH3Q8TE77 659 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
UBE3B-212ENST00000540230 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
UBE3B-212ENST00000540230 VEGFBP49765 207 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 TIMM10P62072 90 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
UBE3B-212ENST00000540230 CFAP100Q494V2 611 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 TLL2Q9Y6L7 1015 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 PHKA1P46020 1223 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 DEFB115Q30KQ5 88 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 CEP85Q6P2H3 762 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 SAPCD2Q86UD0 394 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 CDCA5Q96FF9 252 aa18.69■□□□□ 0.58
UBE3B-212ENST00000540230 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
UBE3B-212ENST00000540230 A0A1B0GUL7 405 aa18.68■□□□□ 0.58
UBE3B-212ENST00000540230 MMP14P50281 582 aa18.68■□□□□ 0.58
UBE3B-212ENST00000540230 DLGAP5Q15398 846 aa18.68■□□□□ 0.58
UBE3B-212ENST00000540230 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
UBE3B-212ENST00000540230 MTMR14Q8NCE2 650 aa18.68■□□□□ 0.58
UBE3B-212ENST00000540230 PRMT6Q96LA8 375 aaPredicted RBP18.68■□□□□ 0.58
UBE3B-212ENST00000540230 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
UBE3B-212ENST00000540230 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
UBE3B-212ENST00000540230 MS4A1P11836 297 aa18.67■□□□□ 0.58
UBE3B-212ENST00000540230 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.58
UBE3B-212ENST00000540230 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
UBE3B-212ENST00000540230 CYP4F22Q6NT55 531 aa18.66■□□□□ 0.58
UBE3B-212ENST00000540230 CLRN2A0PK11 232 aa18.65■□□□□ 0.58
UBE3B-212ENST00000540230 TBC1D22AQ8WUA7 517 aa18.65■□□□□ 0.58
UBE3B-212ENST00000540230 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
UBE3B-212ENST00000540230 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.58
UBE3B-212ENST00000540230 RBM5P52756 815 aaKnown RBP eCLIP18.64■□□□□ 0.58
UBE3B-212ENST00000540230 PAXIP1Q6ZW49 1069 aaPredicted RBP18.64■□□□□ 0.58
UBE3B-212ENST00000540230 GBA2Q9HCG7 927 aaPredicted RBP18.64■□□□□ 0.58
UBE3B-212ENST00000540230 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.58
UBE3B-212ENST00000540230 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.58
UBE3B-212ENST00000540230 WDR33Q9C0J8 1336 aaKnown RBP18.64■□□□□ 0.57
UBE3B-212ENST00000540230 THSD7BQ9C0I4 1608 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 CRKP46108 304 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 GRM1Q13255 1194 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 CAPNS2Q96L46 248 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 SERPINA10Q9UK55 444 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
UBE3B-212ENST00000540230 HUNKP57058 714 aa18.63■□□□□ 0.57
UBE3B-212ENST00000540230 RASGRF1Q13972 1273 aa18.63■□□□□ 0.57
UBE3B-212ENST00000540230 APOBEC3FQ8IUX4 373 aaKnown RBP18.63■□□□□ 0.57
UBE3B-212ENST00000540230 NEUROD6Q96NK8 337 aa18.63■□□□□ 0.57
UBE3B-212ENST00000540230 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
UBE3B-212ENST00000540230 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
UBE3B-212ENST00000540230 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
UBE3B-212ENST00000540230 PRDX5P30044 214 aa18.62■□□□□ 0.57
UBE3B-212ENST00000540230 PDE3AQ14432 1141 aa18.62■□□□□ 0.57
UBE3B-212ENST00000540230 MOB2Q70IA6 237 aa18.62■□□□□ 0.57
UBE3B-212ENST00000540230 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
UBE3B-212ENST00000540230 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms