RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
CCDC130-202ENST00000540216 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
CCDC130-202ENST00000540216 TMEM88BA6NKF7 163 aa16.59■□□□□ 0.25
CCDC130-202ENST00000540216 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
CCDC130-202ENST00000540216 CERS5Q8N5B7 392 aa16.59■□□□□ 0.25
CCDC130-202ENST00000540216 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
CCDC130-202ENST00000540216 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
CCDC130-202ENST00000540216 ZBTB22O15209 634 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
CCDC130-202ENST00000540216 BCAMP50895 628 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC130-202ENST00000540216 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 CEP85Q6P2H3 762 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 TBC1D22AQ8WUA7 517 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
CCDC130-202ENST00000540216 GGA3Q9NZ52 723 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
CCDC130-202ENST00000540216 TRPM7Q96QT4 1865 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 TFCP2Q12800 502 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 SCARF1Q14162 830 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 SULF1Q8IWU6 871 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
CCDC130-202ENST00000540216 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
CCDC130-202ENST00000540216 SEMA3EO15041 775 aa16.56■□□□□ 0.24
CCDC130-202ENST00000540216 DNAJC5GQ8N7S2 189 aa16.56■□□□□ 0.24
CCDC130-202ENST00000540216 MTMR14Q8NCE2 650 aa16.56■□□□□ 0.24
CCDC130-202ENST00000540216 JAG2Q9Y219 1238 aa16.56■□□□□ 0.24
CCDC130-202ENST00000540216 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
CCDC130-202ENST00000540216 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 TRAF5O00463 557 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 WNT10BO00744 389 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 HTRA3P83110 453 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 OS9Q13438 667 aaPredicted RBP16.55■□□□□ 0.24
CCDC130-202ENST00000540216 DLGAP5Q15398 846 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 ANGEL2Q5VTE6 544 aaKnown RBP16.55■□□□□ 0.24
CCDC130-202ENST00000540216 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
CCDC130-202ENST00000540216 WDR66Q8TBY9 1149 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
CCDC130-202ENST00000540216 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
CCDC130-202ENST00000540216 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
CCDC130-202ENST00000540216 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
CCDC130-202ENST00000540216 HMMRO75330 724 aa16.54■□□□□ 0.24
CCDC130-202ENST00000540216 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
CCDC130-202ENST00000540216 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
CCDC130-202ENST00000540216 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
CCDC130-202ENST00000540216 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
CCDC130-202ENST00000540216 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
CCDC130-202ENST00000540216 MAST3O60307 1309 aa16.53■□□□□ 0.24
CCDC130-202ENST00000540216 ASTN2O75129 1339 aaPredicted RBP16.53■□□□□ 0.24
CCDC130-202ENST00000540216 PDS5AQ29RF7 1337 aaKnown RBP16.53■□□□□ 0.24
CCDC130-202ENST00000540216 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
CCDC130-202ENST00000540216 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
CCDC130-202ENST00000540216 XAGE2Q96GT9 111 aa16.53■□□□□ 0.24
CCDC130-202ENST00000540216 SERPINA10Q9UK55 444 aa16.53■□□□□ 0.24
CCDC130-202ENST00000540216 DENND2AQ9ULE3 1009 aa16.53■□□□□ 0.24
CCDC130-202ENST00000540216 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
CCDC130-202ENST00000540216 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 POLR2AP24928 1970 aaKnown RBP16.52■□□□□ 0.24
CCDC130-202ENST00000540216 MYO1BO43795 1136 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.24
CCDC130-202ENST00000540216 ADORA1P30542 326 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 PHKA1P46020 1223 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 TIMM10P62072 90 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
CCDC130-202ENST00000540216 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 CST9Q5W186 159 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 CCDC102BQ68D86 513 aa16.52■□□□□ 0.24
CCDC130-202ENST00000540216 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
CCDC130-202ENST00000540216 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
CCDC130-202ENST00000540216 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
CCDC130-202ENST00000540216 SALL1Q9NSC2 1324 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 ADM5C9JUS6 153 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
CCDC130-202ENST00000540216 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC130-202ENST00000540216 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 ERC1Q8IUD2 1116 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
CCDC130-202ENST00000540216 ABT1Q9ULW3 272 aaKnown RBP16.51■□□□□ 0.23
CCDC130-202ENST00000540216 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC130-202ENST00000540216 TNNI3KQ59H18 835 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
CCDC130-202ENST00000540216 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 TLL2Q9Y6L7 1015 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
CCDC130-202ENST00000540216 FPGT-TNNI3KV9GXZ4 949 aa16.5■□□□□ 0.23
CCDC130-202ENST00000540216 CRKP46108 304 aa16.49■□□□□ 0.23
CCDC130-202ENST00000540216 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
CCDC130-202ENST00000540216 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
CCDC130-202ENST00000540216 TEKT1Q969V4 418 aa16.49■□□□□ 0.23
CCDC130-202ENST00000540216 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
CCDC130-202ENST00000540216 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms