RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 AIDAQ96BJ3 306 aa21.07■□□□□ 0.96
DDB1-215ENST00000539712 PRDM10Q9NQV6 1147 aa21.07■□□□□ 0.96
DDB1-215ENST00000539712 JAG2Q9Y219 1238 aa21.07■□□□□ 0.96
DDB1-215ENST00000539712 FAM205AQ6ZU69 1335 aa21.06■□□□□ 0.96
DDB1-215ENST00000539712 HSPA8P11142 646 aaKnown RBP21.06■□□□□ 0.96
DDB1-215ENST00000539712 PRAMEF18Q5VWM3 479 aa21.06■□□□□ 0.96
DDB1-215ENST00000539712 FBXO33Q7Z6M2 555 aa21.06■□□□□ 0.96
DDB1-215ENST00000539712 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
DDB1-215ENST00000539712 PCDHAC2Q9Y5I4 1007 aa21.06■□□□□ 0.96
DDB1-215ENST00000539712 PDE8BO95263 885 aa21.05■□□□□ 0.96
DDB1-215ENST00000539712 HIBADHP31937 336 aaKnown RBP21.05■□□□□ 0.96
DDB1-215ENST00000539712 LBX1P52954 281 aa21.05■□□□□ 0.96
DDB1-215ENST00000539712 PTPN12Q05209 780 aaKnown RBP21.05■□□□□ 0.96
DDB1-215ENST00000539712 MTMR14Q8NCE2 650 aa21.05■□□□□ 0.96
DDB1-215ENST00000539712 ARHGAP45Q92619 1136 aa21.05■□□□□ 0.96
DDB1-215ENST00000539712 METTL24Q5JXM2 366 aa21.04■□□□□ 0.96
DDB1-215ENST00000539712 RGMBQ6NW40 437 aa21.04■□□□□ 0.96
DDB1-215ENST00000539712 TNS4Q8IZW8 715 aa21.04■□□□□ 0.96
DDB1-215ENST00000539712 HDAC9Q9UKV0 1011 aa21.04■□□□□ 0.96
DDB1-215ENST00000539712 AOX1Q06278 1338 aa21.04■□□□□ 0.96
DDB1-215ENST00000539712 UBTFL1P0CB47 393 aaPredicted RBP21.03■□□□□ 0.96
DDB1-215ENST00000539712 FGFR2P21802 821 aa21.03■□□□□ 0.96
DDB1-215ENST00000539712 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
DDB1-215ENST00000539712 ATG9AQ7Z3C6 839 aa21.03■□□□□ 0.96
DDB1-215ENST00000539712 F8W031 263 aaPredicted RBP21.02■□□□□ 0.96
DDB1-215ENST00000539712 EYA2O00167 538 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 BCAR3O75815 825 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 NOGQ13253 232 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 MOB2Q70IA6 237 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 MEIS3Q99687 375 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 TNNQ9UQP3 1299 aa21.02■□□□□ 0.96
DDB1-215ENST00000539712 FKBP1BP68106 108 aa21.01■□□□□ 0.95
DDB1-215ENST00000539712 DLGAP5Q15398 846 aa21.01■□□□□ 0.95
DDB1-215ENST00000539712 PRMT6Q96LA8 375 aaPredicted RBP21.01■□□□□ 0.95
DDB1-215ENST00000539712 LRRFIP2Q9Y608 721 aaKnown RBP21.01■□□□□ 0.95
DDB1-215ENST00000539712 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
DDB1-215ENST00000539712 SPDYE2BA6NHP3 402 aa21■□□□□ 0.95
DDB1-215ENST00000539712 SPDYE6P0CI01 402 aa21■□□□□ 0.95
DDB1-215ENST00000539712 ZNF157P51786 506 aaPredicted RBP21■□□□□ 0.95
DDB1-215ENST00000539712 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
DDB1-215ENST00000539712 GRIK5Q16478 980 aa21■□□□□ 0.95
DDB1-215ENST00000539712 CCDC102AQ96A19 550 aa21■□□□□ 0.95
DDB1-215ENST00000539712 SLC10A3P09131 477 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 TRIM27P14373 513 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 BCAMP50895 628 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 CFAP100Q494V2 611 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 MFSD14BQ5SR56 506 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 TSKSQ9UJT2 592 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 IQSEC3Q9UPP2 1182 aaPredicted RBP20.99■□□□□ 0.95
DDB1-215ENST00000539712 PAPPA2Q9BXP8 1791 aa20.99■□□□□ 0.95
DDB1-215ENST00000539712 UBE2Q2LH0YL09 131 aa20.98■□□□□ 0.95
DDB1-215ENST00000539712 PUM3Q15397 648 aaKnown RBP20.98■□□□□ 0.95
DDB1-215ENST00000539712 APOBEC3FQ8IUX4 373 aaKnown RBP20.98■□□□□ 0.95
DDB1-215ENST00000539712 KIF23Q02241 960 aaPredicted RBP20.97■□□□□ 0.95
DDB1-215ENST00000539712 RASAL3Q86YV0 1011 aa20.97■□□□□ 0.95
DDB1-215ENST00000539712 BEGAINQ9BUH8 593 aa20.97■□□□□ 0.95
DDB1-215ENST00000539712 DEFB129Q9H1M3 183 aa20.97■□□□□ 0.95
DDB1-215ENST00000539712 CIAO1O76071 339 aa20.96■□□□□ 0.95
DDB1-215ENST00000539712 CAVIN4Q5BKX8 364 aa20.96■□□□□ 0.95
DDB1-215ENST00000539712 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
DDB1-215ENST00000539712 SIL1Q9H173 461 aa20.96■□□□□ 0.95
DDB1-215ENST00000539712 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
DDB1-215ENST00000539712 TTF2Q9UNY4 1162 aaKnown RBP20.96■□□□□ 0.95
DDB1-215ENST00000539712 PA2G4Q9UQ80 394 aaKnown RBP20.96■□□□□ 0.95
DDB1-215ENST00000539712 CLRN2A0PK11 232 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
DDB1-215ENST00000539712 CA12O43570 354 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 VPS37DQ86XT2 251 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 CSRNP1Q96S65 589 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 COPRSQ9NQ92 184 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 SERPINA10Q9UK55 444 aa20.95■□□□□ 0.94
DDB1-215ENST00000539712 IFIT1P09914 478 aaKnown RBP20.94■□□□□ 0.94
DDB1-215ENST00000539712 LPIN2Q92539 896 aa20.94■□□□□ 0.94
DDB1-215ENST00000539712 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
DDB1-215ENST00000539712 SSC5DA1L4H1 1573 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 ECM29Q5VYK3 1845 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 CHAF1AQ13111 956 aaPredicted RBP20.93■□□□□ 0.94
DDB1-215ENST00000539712 MTX1Q13505 466 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 LDLRAD1Q5T700 205 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 FZD1Q9UP38 647 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 HDAC5Q9UQL6 1122 aa20.93■□□□□ 0.94
DDB1-215ENST00000539712 COL1A1P02452 1464 aaPredicted RBP20.93■□□□□ 0.94
DDB1-215ENST00000539712 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
DDB1-215ENST00000539712 GNAI3P08754 354 aa20.92■□□□□ 0.94
DDB1-215ENST00000539712 CRKP46108 304 aa20.92■□□□□ 0.94
DDB1-215ENST00000539712 RBM5P52756 815 aaKnown RBP eCLIP20.92■□□□□ 0.94
DDB1-215ENST00000539712 SPDYE2Q495Y8 402 aa20.92■□□□□ 0.94
DDB1-215ENST00000539712 DZIP1LQ8IYY4 767 aaKnown RBP20.92■□□□□ 0.94
DDB1-215ENST00000539712 CLUAP1Q96AJ1 413 aa20.92■□□□□ 0.94
DDB1-215ENST00000539712 MYO1BO43795 1136 aa20.91■□□□□ 0.94
DDB1-215ENST00000539712 SLC5A1P13866 664 aa20.91■□□□□ 0.94
DDB1-215ENST00000539712 IL15P40933 162 aaPredicted RBP20.91■□□□□ 0.94
DDB1-215ENST00000539712 TBC1D22AQ8WUA7 517 aa20.91■□□□□ 0.94
DDB1-215ENST00000539712 TDRD3Q9H7E2 651 aaKnown RBP20.91■□□□□ 0.94
DDB1-215ENST00000539712 CEP126Q9P2H0 1117 aa20.91■□□□□ 0.94
DDB1-215ENST00000539712 ZNF70Q9UC06 446 aaPredicted RBP20.91■□□□□ 0.94
DDB1-215ENST00000539712 PPP2R3BQ9Y5P8 575 aa20.91■□□□□ 0.94
DDB1-215ENST00000539712 NF2P35240 595 aa20.9■□□□□ 0.94
DDB1-215ENST00000539712 HDLBPQ00341 1268 aaKnown RBP20.9■□□□□ 0.94
DDB1-215ENST00000539712 PRKG1Q13976 671 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms