RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CHAF1AQ13111 956 aaPredicted RBP15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 GORABQ5T7V8 394 aa15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 GPRC5DQ9NZD1 345 aa15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 SHTN1A0MZ66 631 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 KIF3CO14782 793 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 IGHDP01880 384 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 RPS12P25398 132 aaKnown RBP15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 AACSQ86V21 672 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 CLASRPQ8N2M8 674 aaKnown RBP15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 CERS5Q8N5B7 392 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 AGBL3Q8NEM8 1001 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 DPF2Q92785 391 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 GMLQ99445 158 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 LRRCC1Q9C099 1032 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 GNL3LQ9NVN8 582 aaKnown RBP15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 HACL1Q9UJ83 578 aa15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 DBNLQ9UJU6 430 aaKnown RBP15.63■□□□□ 0.09
TSPAN9-207ENST00000539631 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 CNOT7Q9UIV1 285 aaKnown RBP15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 MYO3BQ8WXR4 1341 aa15.62■□□□□ 0.09
TSPAN9-207ENST00000539631 EPHX2P34913 555 aa15.61■□□□□ 0.09
TSPAN9-207ENST00000539631 FKBP1AP62942 108 aaKnown RBP15.61■□□□□ 0.09
TSPAN9-207ENST00000539631 TTC39AQ5SRH9 613 aa15.61■□□□□ 0.09
TSPAN9-207ENST00000539631 MICALL2Q8IY33 904 aa15.61■□□□□ 0.09
TSPAN9-207ENST00000539631 DENND2AQ9ULE3 1009 aa15.61■□□□□ 0.09
TSPAN9-207ENST00000539631 ADAMTSL1Q8N6G6 1762 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 H7C1D1 291 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 SEMA3EO15041 775 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 ZBTB22O15209 634 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 IFIT2P09913 472 aaKnown RBP15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 ARID4AP29374 1257 aaPredicted RBP15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 RASGRF1Q13972 1273 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 SCARF1Q14162 830 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 MFSD14BQ5SR56 506 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 GCC1Q96CN9 775 aa15.6■□□□□ 0.09
TSPAN9-207ENST00000539631 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 UQCRFS1P1P0C7P4 283 aa15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 GRIK5Q16478 980 aa15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 SAMD7Q7Z3H4 446 aa15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 ADARB2Q9NS39 739 aaKnown RBP15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 HMG20BQ9P0W2 317 aa15.59■□□□□ 0.09
TSPAN9-207ENST00000539631 EGFRP00533 1210 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 MCAMP43121 646 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 ZNF280AP59817 542 aaPredicted RBP15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 EAPPQ56P03 285 aaPredicted RBP15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 WDR66Q8TBY9 1149 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 TRPM4Q8TD43 1214 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 TBC1D22AQ8WUA7 517 aa15.58■□□□□ 0.08
TSPAN9-207ENST00000539631 NEFLP07196 543 aa15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 HIRAP54198 1017 aaPredicted RBP15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 TBC1D10BQ4KMP7 808 aaPredicted RBP15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 SMC5Q8IY18 1101 aa15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 SPATA5Q8NB90 893 aa15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 ZNF512BQ96KM6 892 aaPredicted RBP15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 SNRKQ9NRH2 765 aa15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 PDS5AQ29RF7 1337 aaKnown RBP15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
TSPAN9-207ENST00000539631 KIF4BQ2VIQ3 1234 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 PNMA8AQ86V59 439 aaPredicted RBP15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 MYOZ2Q9NPC6 264 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 HDAC9Q9UKV0 1011 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 SALL1Q9NSC2 1324 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 CEP350Q5VT06 3117 aa15.56■□□□□ 0.08
TSPAN9-207ENST00000539631 POLR2AP24928 1970 aaKnown RBP15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 PRDX5P30044 214 aa15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 ZAP70P43403 619 aa15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 OGFOD1Q8N543 542 aa15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
TSPAN9-207ENST00000539631 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 TOMM70O94826 608 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 MMP14P50281 582 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 OTUD7AQ8TE49 926 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 SUGT1Q9Y2Z0 365 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 PCDHAC2Q9Y5I4 1007 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 NDUFB9Q9Y6M9 179 aa15.54■□□□□ 0.08
TSPAN9-207ENST00000539631 MAST2Q6P0Q8 1798 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms