RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OS9Q13438 667 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-206ENST00000539417 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
RPAIN-206ENST00000539417 CHMP4BQ9H444 224 aaKnown RBP19.48■□□□□ 0.71
RPAIN-206ENST00000539417 ASTN2O75129 1339 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-206ENST00000539417 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
RPAIN-206ENST00000539417 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-206ENST00000539417 KIAA0825Q8IV33 1275 aa19.48■□□□□ 0.71
RPAIN-206ENST00000539417 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
RPAIN-206ENST00000539417 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
RPAIN-206ENST00000539417 H7C1D1 291 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 APBB1O00213 710 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-206ENST00000539417 TNNI3KQ59H18 835 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 MAP1SQ66K74 1059 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-206ENST00000539417 CCDC102BQ68D86 513 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 USP50Q70EL3 339 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-206ENST00000539417 PNMA8AQ86V59 439 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-206ENST00000539417 LDHDQ86WU2 507 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 PCDHAC2Q9Y5I4 1007 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 FPGT-TNNI3KV9GXZ4 949 aa19.47■□□□□ 0.71
RPAIN-206ENST00000539417 F8W031 263 aaPredicted RBP19.46■□□□□ 0.71
RPAIN-206ENST00000539417 USP17L8P0C7I0 530 aa19.46■□□□□ 0.71
RPAIN-206ENST00000539417 CHADLQ6NUI6 762 aa19.46■□□□□ 0.71
RPAIN-206ENST00000539417 TLR7Q9NYK1 1049 aaKnown RBP19.46■□□□□ 0.71
RPAIN-206ENST00000539417 AKAP2Q9Y2D5 859 aa19.46■□□□□ 0.71
RPAIN-206ENST00000539417 FMR1Q06787 632 aaKnown RBP eCLIP19.45■□□□□ 0.7
RPAIN-206ENST00000539417 SMC1BQ8NDV3 1235 aa19.45■□□□□ 0.7
RPAIN-206ENST00000539417 EAF2Q96CJ1 260 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-206ENST00000539417 DBNDD2Q9BQY9 259 aa19.45■□□□□ 0.7
RPAIN-206ENST00000539417 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
RPAIN-206ENST00000539417 MYH13Q9UKX3 1938 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 HMMRO75330 724 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 KIF4BQ2VIQ3 1234 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 MFSD14BQ5SR56 506 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 DLK2Q6UY11 383 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 CCDC8Q9H0W5 538 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-206ENST00000539417 MYOZ2Q9NPC6 264 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 AOX1Q06278 1338 aa19.44■□□□□ 0.7
RPAIN-206ENST00000539417 FRAT2O75474 233 aaPredicted RBP19.43■□□□□ 0.7
RPAIN-206ENST00000539417 FSTL1Q12841 308 aa19.43■□□□□ 0.7
RPAIN-206ENST00000539417 SCARF1Q14162 830 aa19.43■□□□□ 0.7
RPAIN-206ENST00000539417 RHPN1Q8TCX5 695 aa19.43■□□□□ 0.7
RPAIN-206ENST00000539417 GPR108Q9NPR9 543 aa19.43■□□□□ 0.7
RPAIN-206ENST00000539417 MYO3BQ8WXR4 1341 aa19.43■□□□□ 0.7
RPAIN-206ENST00000539417 ITGBL1O95965 494 aaPredicted RBP19.42■□□□□ 0.7
RPAIN-206ENST00000539417 FKBP1AP62942 108 aaKnown RBP19.42■□□□□ 0.7
RPAIN-206ENST00000539417 RASGRF1Q13972 1273 aa19.42■□□□□ 0.7
RPAIN-206ENST00000539417 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
RPAIN-206ENST00000539417 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
RPAIN-206ENST00000539417 DBNLQ9UJU6 430 aaKnown RBP19.42■□□□□ 0.7
RPAIN-206ENST00000539417 SCAF8Q9UPN6 1271 aaKnown RBP19.42■□□□□ 0.7
RPAIN-206ENST00000539417 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
RPAIN-206ENST00000539417 CNTROBQ8N137 903 aa19.41■□□□□ 0.7
RPAIN-206ENST00000539417 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
RPAIN-206ENST00000539417 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
RPAIN-206ENST00000539417 TRAF5O00463 557 aa19.4■□□□□ 0.7
RPAIN-206ENST00000539417 POLR2AP24928 1970 aaKnown RBP19.4■□□□□ 0.7
RPAIN-206ENST00000539417 HTRA3P83110 453 aa19.4■□□□□ 0.7
RPAIN-206ENST00000539417 ERC1Q8IUD2 1116 aa19.4■□□□□ 0.7
RPAIN-206ENST00000539417 ZBED3Q96IU2 234 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-206ENST00000539417 GLIS2Q9BZE0 524 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-206ENST00000539417 CEP350Q5VT06 3117 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 PASKQ96RG2 1323 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 WNT10BO00744 389 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 AACSQ86V21 672 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 DCTPP1Q9H773 170 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 HMG20BQ9P0W2 317 aa19.39■□□□□ 0.69
RPAIN-206ENST00000539417 TTF2Q9UNY4 1162 aaKnown RBP19.39■□□□□ 0.69
RPAIN-206ENST00000539417 ARID4AP29374 1257 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-206ENST00000539417 MCAMP43121 646 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 HSP90AB4PQ58FF6 505 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 OGFOD1Q8N543 542 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 GNL3LQ9NVN8 582 aaKnown RBP19.38■□□□□ 0.69
RPAIN-206ENST00000539417 GGA3Q9NZ52 723 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
RPAIN-206ENST00000539417 RAB11FIP3O75154 756 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 HSPA6P17066 643 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 PRDX5P30044 214 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 CFAP100Q494V2 611 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 ANGEL2Q5VTE6 544 aaKnown RBP19.37■□□□□ 0.69
RPAIN-206ENST00000539417 ZC3H15Q8WU90 426 aaKnown RBP19.37■□□□□ 0.69
RPAIN-206ENST00000539417 PRMT6Q96LA8 375 aaPredicted RBP19.37■□□□□ 0.69
RPAIN-206ENST00000539417 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 AKAP11Q9UKA4 1901 aa19.37■□□□□ 0.69
RPAIN-206ENST00000539417 ADM5C9JUS6 153 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 SEMA3EO15041 775 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 USP48Q86UV5 1035 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 WDR66Q8TBY9 1149 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 TBC1D22AQ8WUA7 517 aa19.36■□□□□ 0.69
RPAIN-206ENST00000539417 ZBTB22O15209 634 aa19.35■□□□□ 0.69
RPAIN-206ENST00000539417 NDUFB9Q9Y6M9 179 aa19.35■□□□□ 0.69
RPAIN-206ENST00000539417 CRKP46108 304 aa19.35■□□□□ 0.69
RPAIN-206ENST00000539417 DLGAP5Q15398 846 aa19.35■□□□□ 0.69
RPAIN-206ENST00000539417 TTC39AQ5SRH9 613 aa19.35■□□□□ 0.69
RPAIN-206ENST00000539417 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms