RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 MIA2Q96PC5 1412 aa7.68□□□□□ -1.18
LDHC-206ENST00000539369 DEPDC5O75140 1603 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 RNF17Q9BXT8 1623 aaKnown RBP7.67□□□□□ -1.18
LDHC-206ENST00000539369 STRCP1A6NGW2 1772 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 LGR5O75473 907 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 NFKB1P19838 968 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 HIF1AQ16665 826 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 FAM35AQ86V20 835 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 VRTNQ9H8Y1 702 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.67□□□□□ -1.18
LDHC-206ENST00000539369 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 MBD5Q9P267 1494 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
LDHC-206ENST00000539369 KIAA1324LA8MWY0 1029 aaPredicted RBP7.66□□□□□ -1.18
LDHC-206ENST00000539369 DLL1O00548 723 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 KIF3BO15066 747 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 ALX3O95076 343 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 CPB1P15086 417 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 GRNP28799 593 aaKnown RBP7.66□□□□□ -1.18
LDHC-206ENST00000539369 FZD5Q13467 585 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 PERM1Q5SV97 790 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 SLC51AQ86UW1 340 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 ANKMY2Q8IV38 441 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 CCNB3Q8WWL7 1395 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 FYCO1Q9BQS8 1478 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 KDM5DQ9BY66 1539 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 FAM135AQ9P2D6 1515 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 SRCAPQ6ZRS2 3230 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 ADGBQ8N7X0 1667 aa7.66□□□□□ -1.18
LDHC-206ENST00000539369 ZBTB42B2RXF5 422 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 SYNMO15061 1565 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 ADAMTS4O75173 837 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 IGFBP4P22692 258 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 RTN1Q16799 776 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 WASHC2CQ9Y4E1 1318 aa7.65□□□□□ -1.18
LDHC-206ENST00000539369 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 GP2P55259 537 aaKnown RBP7.64□□□□□ -1.19
LDHC-206ENST00000539369 IER5Q5VY09 327 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 WFDC8Q8IUA0 241 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 ARXQ96QS3 562 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 FRRS1LQ9P0K9 344 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 RNF114Q9Y508 228 aa7.64□□□□□ -1.19
LDHC-206ENST00000539369 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
LDHC-206ENST00000539369 CCINQ13939 588 aa7.63□□□□□ -1.19
LDHC-206ENST00000539369 CFAP70Q5T0N1 1121 aa7.63□□□□□ -1.19
LDHC-206ENST00000539369 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
LDHC-206ENST00000539369 AKTIPQ9H8T0 292 aa7.63□□□□□ -1.19
LDHC-206ENST00000539369 FAM135BQ49AJ0 1406 aa7.62□□□□□ -1.19
LDHC-206ENST00000539369 TGFB1P01137 390 aa7.62□□□□□ -1.19
LDHC-206ENST00000539369 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
LDHC-206ENST00000539369 DMGDHQ9UI17 866 aaKnown RBP7.62□□□□□ -1.19
LDHC-206ENST00000539369 BCS1LQ9Y276 419 aa7.62□□□□□ -1.19
LDHC-206ENST00000539369 ZC3H13Q5T200 1668 aaKnown RBP7.62□□□□□ -1.19
LDHC-206ENST00000539369 SETD1AO15047 1707 aaKnown RBP7.61□□□□□ -1.19
LDHC-206ENST00000539369 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
LDHC-206ENST00000539369 LTKP29376 864 aa7.61□□□□□ -1.19
LDHC-206ENST00000539369 TTC9Q92623 222 aa7.61□□□□□ -1.19
LDHC-206ENST00000539369 TIAM1Q13009 1591 aa7.61□□□□□ -1.19
LDHC-206ENST00000539369 SCAF11Q99590 1463 aaKnown RBP7.61□□□□□ -1.19
LDHC-206ENST00000539369 MTUS2Q5JR59 1369 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 MAP3K6O95382 1288 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 WEE1P30291 646 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 MLLT1Q03111 559 aaPredicted RBP7.6□□□□□ -1.19
LDHC-206ENST00000539369 Q6ZS46 218 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 TMEM130Q8N3G9 435 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 ERVK-7P63135 1459 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 NCOA2Q15596 1464 aa7.6□□□□□ -1.19
LDHC-206ENST00000539369 ABCC3O15438 1527 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 FOXO3O43524 673 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 ELMSAN1Q6PJG2 1045 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 FAM200AQ8TCP9 573 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 QTRT2Q9H974 415 aaKnown RBP7.59□□□□□ -1.19
LDHC-206ENST00000539369 KLK14Q9P0G3 267 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 CCDC141Q6ZP82 1450 aa7.59□□□□□ -1.19
LDHC-206ENST00000539369 XIRP1Q702N8 1843 aaKnown RBP7.59□□□□□ -1.19
LDHC-206ENST00000539369 TMEM94Q12767 1356 aa7.59□□□□□ -1.2
LDHC-206ENST00000539369 ARHGAP23Q9P227 1491 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 EPB42P16452 691 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 IDH3AP50213 366 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 DGKZQ13574 1117 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 PCSK7Q16549 785 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
LDHC-206ENST00000539369 TXNDC2Q86VQ3 553 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 VTI1AQ96AJ9 217 aa7.58□□□□□ -1.2
LDHC-206ENST00000539369 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
LDHC-206ENST00000539369 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 SPINK2P20155 84 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 RFX1P22670 979 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 INPP5BP32019 993 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 KRT25Q7Z3Z0 450 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 AGGF1Q8N302 714 aaeCLIP7.57□□□□□ -1.2
LDHC-206ENST00000539369 SMG9Q9H0W8 520 aaKnown RBP7.57□□□□□ -1.2
LDHC-206ENST00000539369 RAXQ9Y2V3 346 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 SLIT1O75093 1534 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms