RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 RABL6Q3YEC7 729 aaPredicted RBP25.52■■□□□ 1.68
MSRB3-208ENST00000538725 PUS3Q9BZE2 481 aaKnown RBP25.52■■□□□ 1.68
MSRB3-208ENST00000538725 RIPOR2Q9Y4F9 1068 aa25.52■■□□□ 1.68
MSRB3-208ENST00000538725 SASH1O94885 1247 aa25.51■■□□□ 1.67
MSRB3-208ENST00000538725 FKBP1AP62942 108 aaKnown RBP25.51■■□□□ 1.67
MSRB3-208ENST00000538725 KIF23Q02241 960 aaPredicted RBP25.51■■□□□ 1.67
MSRB3-208ENST00000538725 PRAMEF18Q5VWM3 479 aa25.51■■□□□ 1.67
MSRB3-208ENST00000538725 CERS5Q8N5B7 392 aa25.51■■□□□ 1.67
MSRB3-208ENST00000538725 ZBED3Q96IU2 234 aaPredicted RBP25.51■■□□□ 1.67
MSRB3-208ENST00000538725 SLC10A3P09131 477 aa25.5■■□□□ 1.67
MSRB3-208ENST00000538725 USP44Q9H0E7 712 aa25.5■■□□□ 1.67
MSRB3-208ENST00000538725 MROH5Q6ZUA9 1318 aa25.49■■□□□ 1.67
MSRB3-208ENST00000538725 DLGAP5Q15398 846 aa25.49■■□□□ 1.67
MSRB3-208ENST00000538725 MTMR14Q8NCE2 650 aa25.49■■□□□ 1.67
MSRB3-208ENST00000538725 NF2P35240 595 aa25.48■■□□□ 1.67
MSRB3-208ENST00000538725 APOBEC3FQ8IUX4 373 aaKnown RBP25.48■■□□□ 1.67
MSRB3-208ENST00000538725 ANKRD44Q8N8A2 993 aa25.48■■□□□ 1.67
MSRB3-208ENST00000538725 SMC4Q9NTJ3 1288 aa25.48■■□□□ 1.67
MSRB3-208ENST00000538725 PAPPA2Q9BXP8 1791 aa25.48■■□□□ 1.67
MSRB3-208ENST00000538725 CT47B1P0C2W7 299 aaPredicted RBP25.47■■□□□ 1.67
MSRB3-208ENST00000538725 HIBADHP31937 336 aaKnown RBP25.47■■□□□ 1.67
MSRB3-208ENST00000538725 TDRD7Q8NHU6 1098 aaKnown RBP25.47■■□□□ 1.67
MSRB3-208ENST00000538725 FAM84BQ96KN1 310 aaPredicted RBP25.47■■□□□ 1.67
MSRB3-208ENST00000538725 FAM205AQ6ZU69 1335 aa25.46■■□□□ 1.67
MSRB3-208ENST00000538725 UBE2Q2LH0YL09 131 aa25.46■■□□□ 1.67
MSRB3-208ENST00000538725 MOB2Q70IA6 237 aa25.46■■□□□ 1.67
MSRB3-208ENST00000538725 F8W031 263 aaPredicted RBP25.45■■□□□ 1.66
MSRB3-208ENST00000538725 GYG1P46976 350 aa25.45■■□□□ 1.66
MSRB3-208ENST00000538725 TTLL12Q14166 644 aaPredicted RBP25.45■■□□□ 1.66
MSRB3-208ENST00000538725 LRRC24Q50LG9 513 aa25.45■■□□□ 1.66
MSRB3-208ENST00000538725 RASAL3Q86YV0 1011 aa25.45■■□□□ 1.66
MSRB3-208ENST00000538725 REM2Q8IYK8 340 aaPredicted RBP25.45■■□□□ 1.66
MSRB3-208ENST00000538725 CSRNP1Q96S65 589 aa25.45■■□□□ 1.66
MSRB3-208ENST00000538725 JAG2Q9Y219 1238 aa25.45■■□□□ 1.66
MSRB3-208ENST00000538725 CFAP100Q494V2 611 aa25.44■■□□□ 1.66
MSRB3-208ENST00000538725 SAGE1Q9NXZ1 904 aa25.44■■□□□ 1.66
MSRB3-208ENST00000538725 METTL24Q5JXM2 366 aa25.43■■□□□ 1.66
MSRB3-208ENST00000538725 DEFB129Q9H1M3 183 aa25.43■■□□□ 1.66
MSRB3-208ENST00000538725 CASP8AP2Q9UKL3 1982 aa25.43■■□□□ 1.66
MSRB3-208ENST00000538725 AKAP11Q9UKA4 1901 aa25.42■■□□□ 1.66
MSRB3-208ENST00000538725 MYO1BO43795 1136 aa25.42■■□□□ 1.66
MSRB3-208ENST00000538725 ABHD8Q96I13 439 aa25.42■■□□□ 1.66
MSRB3-208ENST00000538725 PRMT6Q96LA8 375 aaPredicted RBP25.42■■□□□ 1.66
MSRB3-208ENST00000538725 RNF186Q9NXI6 227 aa25.42■■□□□ 1.66
MSRB3-208ENST00000538725 NOB1Q9ULX3 412 aaKnown RBP25.42■■□□□ 1.66
MSRB3-208ENST00000538725 SPDYE2BA6NHP3 402 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 PDE8BO95263 885 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 SPDYE6P0CI01 402 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 MFSD14BQ5SR56 506 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 ARMC9Q7Z3E5 817 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 FBXO33Q7Z6M2 555 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 VPS37DQ86XT2 251 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 KLHDC4Q8TBB5 520 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 PCDHAC2Q9Y5I4 1007 aa25.41■■□□□ 1.66
MSRB3-208ENST00000538725 TRPA1O75762 1119 aa25.4■■□□□ 1.66
MSRB3-208ENST00000538725 RBM5P52756 815 aaKnown RBP eCLIP25.4■■□□□ 1.66
MSRB3-208ENST00000538725 VGLL2Q8N8G2 317 aa25.4■■□□□ 1.66
MSRB3-208ENST00000538725 CAVIN4Q5BKX8 364 aa25.39■■□□□ 1.66
MSRB3-208ENST00000538725 PPP2R3BQ9Y5P8 575 aa25.39■■□□□ 1.66
MSRB3-208ENST00000538725 ECM29Q5VYK3 1845 aa25.39■■□□□ 1.65
MSRB3-208ENST00000538725 COL1A1P02452 1464 aaPredicted RBP25.39■■□□□ 1.65
MSRB3-208ENST00000538725 PRKG1Q13976 671 aa25.38■■□□□ 1.65
MSRB3-208ENST00000538725 API5Q9BZZ5 524 aaKnown RBP25.38■■□□□ 1.65
MSRB3-208ENST00000538725 TTF2Q9UNY4 1162 aaKnown RBP25.38■■□□□ 1.65
MSRB3-208ENST00000538725 CLRN2A0PK11 232 aa25.37■■□□□ 1.65
MSRB3-208ENST00000538725 PTPN12Q05209 780 aaKnown RBP25.37■■□□□ 1.65
MSRB3-208ENST00000538725 SERPINA10Q9UK55 444 aa25.37■■□□□ 1.65
MSRB3-208ENST00000538725 UBTFL1P0CB47 393 aaPredicted RBP25.36■■□□□ 1.65
MSRB3-208ENST00000538725 RFX5P48382 616 aaPredicted RBP25.36■■□□□ 1.65
MSRB3-208ENST00000538725 LDLRAD1Q5T700 205 aa25.36■■□□□ 1.65
MSRB3-208ENST00000538725 ANGEL1Q9UNK9 670 aaKnown RBP25.36■■□□□ 1.65
MSRB3-208ENST00000538725 EYA2O00167 538 aa25.35■■□□□ 1.65
MSRB3-208ENST00000538725 FRAT2O75474 233 aaPredicted RBP25.35■■□□□ 1.65
MSRB3-208ENST00000538725 RARSP54136 660 aaKnown RBP25.35■■□□□ 1.65
MSRB3-208ENST00000538725 SUPT20HL1Q3ZLR7 823 aa25.35■■□□□ 1.65
MSRB3-208ENST00000538725 VEZTQ9HBM0 779 aa25.35■■□□□ 1.65
MSRB3-208ENST00000538725 IQSEC3Q9UPP2 1182 aaPredicted RBP25.35■■□□□ 1.65
MSRB3-208ENST00000538725 HDAC5Q9UQL6 1122 aa25.35■■□□□ 1.65
MSRB3-208ENST00000538725 PPP1R12BO60237 982 aaPredicted RBP25.34■■□□□ 1.65
MSRB3-208ENST00000538725 FGFR2P21802 821 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 TM4SF4P48230 202 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 BCAMP50895 628 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 PUM3Q15397 648 aaKnown RBP25.34■■□□□ 1.65
MSRB3-208ENST00000538725 TBC1D22AQ8WUA7 517 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 MCOLN1Q9GZU1 580 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 AOX1Q06278 1338 aa25.34■■□□□ 1.65
MSRB3-208ENST00000538725 IFIT1P09914 478 aaKnown RBP25.33■■□□□ 1.65
MSRB3-208ENST00000538725 MAP3K11Q16584 847 aa25.33■■□□□ 1.65
MSRB3-208ENST00000538725 KIF16BQ96L93 1317 aa25.33■■□□□ 1.64
MSRB3-208ENST00000538725 CHAF1AQ13111 956 aaPredicted RBP25.32■■□□□ 1.64
MSRB3-208ENST00000538725 DGKZQ13574 1117 aa25.32■■□□□ 1.64
MSRB3-208ENST00000538725 RASA3Q14644 834 aa25.32■■□□□ 1.64
MSRB3-208ENST00000538725 DZIP1LQ8IYY4 767 aaKnown RBP25.32■■□□□ 1.64
MSRB3-208ENST00000538725 ARHGAP45Q92619 1136 aa25.32■■□□□ 1.64
MSRB3-208ENST00000538725 ZNF70Q9UC06 446 aaPredicted RBP25.32■■□□□ 1.64
MSRB3-208ENST00000538725 FZD1Q9UP38 647 aa25.32■■□□□ 1.64
MSRB3-208ENST00000538725 CRKP46108 304 aa25.31■■□□□ 1.64
MSRB3-208ENST00000538725 SPDYE2Q495Y8 402 aa25.31■■□□□ 1.64
MSRB3-208ENST00000538725 NBPF12Q5TAG4 269 aaPredicted RBP25.31■■□□□ 1.64
MSRB3-208ENST00000538725 ATG9AQ7Z3C6 839 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms