RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 MYO1BO43795 1136 aa12.41□□□□□ -0.42
CCDC170-202ENST00000537358 TAF5LO75529 589 aa12.41□□□□□ -0.42
CCDC170-202ENST00000537358 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
CCDC170-202ENST00000537358 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
CCDC170-202ENST00000537358 CCDC85CA6NKD9 419 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 PLIN1O60240 522 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 SASH1O94885 1247 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 KLRK1P26718 216 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 ARMC9Q7Z3E5 817 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
CCDC170-202ENST00000537358 ZIC5Q96T25 663 aa12.4□□□□□ -0.42
CCDC170-202ENST00000537358 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
CCDC170-202ENST00000537358 E9PSI1 815 aa12.39□□□□□ -0.43
CCDC170-202ENST00000537358 TRPA1O75762 1119 aa12.39□□□□□ -0.43
CCDC170-202ENST00000537358 DGKZQ13574 1117 aa12.39□□□□□ -0.43
CCDC170-202ENST00000537358 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
CCDC170-202ENST00000537358 COL1A1P02452 1464 aaPredicted RBP12.39□□□□□ -0.43
CCDC170-202ENST00000537358 PTPRCP08575 1304 aa12.38□□□□□ -0.43
CCDC170-202ENST00000537358 IL1R1P14778 569 aa12.38□□□□□ -0.43
CCDC170-202ENST00000537358 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
CCDC170-202ENST00000537358 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
CCDC170-202ENST00000537358 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
CCDC170-202ENST00000537358 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
CCDC170-202ENST00000537358 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
CCDC170-202ENST00000537358 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-202ENST00000537358 UBE2Q2LH0YL09 131 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 SNAP23O00161 211 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC170-202ENST00000537358 UBE4AQ14139 1066 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
CCDC170-202ENST00000537358 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
CCDC170-202ENST00000537358 SREBF2Q12772 1141 aa12.36□□□□□ -0.43
CCDC170-202ENST00000537358 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
CCDC170-202ENST00000537358 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
CCDC170-202ENST00000537358 PPP2R3BQ9Y5P8 575 aa12.36□□□□□ -0.43
CCDC170-202ENST00000537358 ZNF521Q96K83 1311 aa12.36□□□□□ -0.43
CCDC170-202ENST00000537358 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
CCDC170-202ENST00000537358 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
CCDC170-202ENST00000537358 PRKG1Q13976 671 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 SUPT20HL1Q3ZLR7 823 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
CCDC170-202ENST00000537358 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
CCDC170-202ENST00000537358 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
CCDC170-202ENST00000537358 UTYO14607 1347 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
CCDC170-202ENST00000537358 NBPF7P0C2Y1 421 aaPredicted RBP12.34□□□□□ -0.43
CCDC170-202ENST00000537358 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 BICC1Q9H694 974 aaKnown RBP12.34□□□□□ -0.43
CCDC170-202ENST00000537358 FAM205AQ6ZU69 1335 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
CCDC170-202ENST00000537358 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
CCDC170-202ENST00000537358 MLLT1Q03111 559 aaPredicted RBP12.33□□□□□ -0.44
CCDC170-202ENST00000537358 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
CCDC170-202ENST00000537358 CTU1Q7Z7A3 348 aaKnown RBP12.33□□□□□ -0.44
CCDC170-202ENST00000537358 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
CCDC170-202ENST00000537358 JAG2Q9Y219 1238 aa12.33□□□□□ -0.44
CCDC170-202ENST00000537358 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 GYG1P46976 350 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 TM4SF4P48230 202 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 INHBEP58166 350 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
CCDC170-202ENST00000537358 HDAC5Q9UQL6 1122 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
CCDC170-202ENST00000537358 MANSC4A6NHS7 340 aaPredicted RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 TNNI2P48788 182 aa12.31□□□□□ -0.44
CCDC170-202ENST00000537358 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
CCDC170-202ENST00000537358 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
CCDC170-202ENST00000537358 FAM84BQ96KN1 310 aaPredicted RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 PRMT6Q96LA8 375 aaPredicted RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
CCDC170-202ENST00000537358 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
CCDC170-202ENST00000537358 PDE8BO95263 885 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms