RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 PI4KAP2A4QPH2 592 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 SERPINC1P01008 464 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 USP5P45974 858 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
LMO3-215ENST00000537304 LONRF2Q1L5Z9 754 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 HSP90B2PQ58FF3 399 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 VSTM4Q8IW00 320 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 PI4KAP1Q8N8J0 262 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 JMYQ8N9B5 988 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
LMO3-215ENST00000537304 TRERF1Q96PN7 1200 aa12.48□□□□□ -0.41
LMO3-215ENST00000537304 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
LMO3-215ENST00000537304 GNG11P61952 73 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 SCRN1Q12765 414 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 DPCR1Q3MIW9 517 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 LRRN4CLQ8ND94 238 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
LMO3-215ENST00000537304 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
LMO3-215ENST00000537304 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 UTYO14607 1347 aa12.47□□□□□ -0.41
LMO3-215ENST00000537304 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 SASH3O75995 380 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.41
LMO3-215ENST00000537304 KCNA6P17658 529 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 ATP5JP18859 108 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 CMA1P23946 247 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 FAM71BQ8TC56 605 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 AGXT2Q9BYV1 514 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 DEF6Q9H4E7 631 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
LMO3-215ENST00000537304 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.42
LMO3-215ENST00000537304 SPTLC2O15270 562 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 DDX58O95786 925 aaKnown RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 MCM3P25205 808 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 NCAPHQ15003 741 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 CFAP100Q494V2 611 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 LINC00301Q8NCQ3 95 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 TCEANC2Q96MN5 208 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 BAG1Q99933 345 aaPredicted RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 SALL1Q9NSC2 1324 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 VWA3AA6NCI4 1184 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 NDUFA8P51970 172 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 EFCAB13Q8IY85 973 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 MYCBPQ99417 103 aaPredicted RBP12.45□□□□□ -0.42
LMO3-215ENST00000537304 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 RAB21Q9UL25 225 aa12.45□□□□□ -0.42
LMO3-215ENST00000537304 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 ZNF202O95125 648 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 MSANTD4Q8NCY6 345 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 LINS1Q8NG48 757 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 CTCFLQ8NI51 663 aaPredicted RBP12.44□□□□□ -0.42
LMO3-215ENST00000537304 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
LMO3-215ENST00000537304 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 CHPF2Q9P2E5 772 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 OVOS2A0A0G2JMS6 1433 aa12.44□□□□□ -0.42
LMO3-215ENST00000537304 GRM8O00222 908 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 CPP00450 1065 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 CCDC175P0C221 793 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
LMO3-215ENST00000537304 USP8P40818 1118 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 SUGP1Q8IWZ8 645 aaKnown RBP12.43□□□□□ -0.42
LMO3-215ENST00000537304 NCAPGQ9BPX3 1015 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 BOLA2Q9H3K6 86 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 JRKLQ9Y4A0 524 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
LMO3-215ENST00000537304 A0A1B0GVL5 298 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 KIF5CO60282 957 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 SASH1O94885 1247 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 CORO7P57737 925 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 MAP3K15Q6ZN16 1313 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 VIPAS39Q9H9C1 493 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms