RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SASH1O94885 1247 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 FKBP1AP62942 108 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 HDAC5Q9UQL6 1122 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 CYP4F22Q6NT55 531 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 ZBED3Q96IU2 234 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 CAPNS2Q96L46 248 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
TNFRSF1A-209ENST00000536717 FAM205AQ6ZU69 1335 aa22.3■■□□□ 1.16
TNFRSF1A-209ENST00000536717 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
TNFRSF1A-209ENST00000536717 FBXO33Q7Z6M2 555 aa22.3■■□□□ 1.16
TNFRSF1A-209ENST00000536717 SCAF8Q9UPN6 1271 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-209ENST00000536717 GNAI3P08754 354 aa22.29■■□□□ 1.16
TNFRSF1A-209ENST00000536717 FGFR2P21802 821 aa22.29■■□□□ 1.16
TNFRSF1A-209ENST00000536717 PAXIP1Q6ZW49 1069 aaPredicted RBP22.29■■□□□ 1.16
TNFRSF1A-209ENST00000536717 HHIPL1Q96JK4 782 aa22.29■■□□□ 1.16
TNFRSF1A-209ENST00000536717 FBXO3Q9UK99 471 aa22.29■■□□□ 1.16
TNFRSF1A-209ENST00000536717 CDCA5Q96FF9 252 aa22.28■■□□□ 1.16
TNFRSF1A-209ENST00000536717 SIL1Q9H173 461 aa22.28■■□□□ 1.16
TNFRSF1A-209ENST00000536717 GBA2Q9HCG7 927 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1A-209ENST00000536717 PA2G4Q9UQ80 394 aaKnown RBP22.28■■□□□ 1.16
TNFRSF1A-209ENST00000536717 F8W031 263 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-209ENST00000536717 ECE1P42892 770 aa22.27■■□□□ 1.16
TNFRSF1A-209ENST00000536717 PUM3Q15397 648 aaKnown RBP22.27■■□□□ 1.16
TNFRSF1A-209ENST00000536717 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
TNFRSF1A-209ENST00000536717 CIAO1O76071 339 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 COPRSQ9NQ92 184 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 IQSEC3Q9UPP2 1182 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 PCDHAC2Q9Y5I4 1007 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 BCAMP50895 628 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 HUNKP57058 714 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 GRM1Q13255 1194 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 MTX1Q13505 466 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 CAVIN4Q5BKX8 364 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 MFSD14BQ5SR56 506 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 VPS37DQ86XT2 251 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 MTMR14Q8NCE2 650 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
TNFRSF1A-209ENST00000536717 PAPPA2Q9BXP8 1791 aa22.25■■□□□ 1.15
TNFRSF1A-209ENST00000536717 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-209ENST00000536717 C2orf69Q8N8R5 385 aa22.25■■□□□ 1.15
TNFRSF1A-209ENST00000536717 WBP1LQ9NX94 342 aa22.25■■□□□ 1.15
TNFRSF1A-209ENST00000536717 DLGAP5Q15398 846 aa22.24■■□□□ 1.15
TNFRSF1A-209ENST00000536717 LPIN2Q92539 896 aa22.24■■□□□ 1.15
TNFRSF1A-209ENST00000536717 SRGAP3O43295 1099 aa22.23■■□□□ 1.15
TNFRSF1A-209ENST00000536717 AOC2O75106 756 aa22.23■■□□□ 1.15
TNFRSF1A-209ENST00000536717 CFAP100Q494V2 611 aa22.23■■□□□ 1.15
TNFRSF1A-209ENST00000536717 PRAMEF18Q5VWM3 479 aa22.23■■□□□ 1.15
TNFRSF1A-209ENST00000536717 FOXN1O15353 648 aa22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 GNAI2P04899 355 aa22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 SLC5A1P13866 664 aa22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 IL15P40933 162 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 CEP126Q9P2H0 1117 aa22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 AOX1Q06278 1338 aa22.22■■□□□ 1.15
TNFRSF1A-209ENST00000536717 SPDYE2BA6NHP3 402 aa22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 SPDYE6P0CI01 402 aa22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 RLBP1P12271 317 aa22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 CHAF1AQ13111 956 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 COL13A1Q5TAT6 717 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 APOBEC3FQ8IUX4 373 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 FRAT2O75474 233 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 MAP2K2P36507 400 aa22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 MAP2K1Q02750 393 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 GRIK5Q16478 980 aa22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 DZIP1LQ8IYY4 767 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-209ENST00000536717 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
TNFRSF1A-209ENST00000536717 RGMBQ6NW40 437 aa22.2■■□□□ 1.14
TNFRSF1A-209ENST00000536717 FTSJ3Q8IY81 847 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-209ENST00000536717 COL1A1P02452 1464 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1A-209ENST00000536717 PNMA6EA0A0J9YXQ4 647 aa22.19■■□□□ 1.14
TNFRSF1A-209ENST00000536717 TBC1D22AQ8WUA7 517 aa22.19■■□□□ 1.14
TNFRSF1A-209ENST00000536717 FAM155AB1AL88 458 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-209ENST00000536717 FKBP1BP68106 108 aa22.18■■□□□ 1.14
TNFRSF1A-209ENST00000536717 AIDAQ96BJ3 306 aa22.18■■□□□ 1.14
TNFRSF1A-209ENST00000536717 ZIC5Q96T25 663 aa22.18■■□□□ 1.14
TNFRSF1A-209ENST00000536717 SERPINA10Q9UK55 444 aa22.18■■□□□ 1.14
TNFRSF1A-209ENST00000536717 CLRN2A0PK11 232 aa22.17■■□□□ 1.14
TNFRSF1A-209ENST00000536717 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.14
TNFRSF1A-209ENST00000536717 MOB2Q70IA6 237 aa22.17■■□□□ 1.14
TNFRSF1A-209ENST00000536717 AKAP11Q9UKA4 1901 aa22.17■■□□□ 1.14
TNFRSF1A-209ENST00000536717 MYO1BO43795 1136 aa22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 ITPRIPQ8IWB1 547 aa22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 DEFB129Q9H1M3 183 aa22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 ZBTB7BO15156 539 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 CRKP46108 304 aa22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 ZNF157P51786 506 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 NOGQ13253 232 aa22.16■■□□□ 1.14
TNFRSF1A-209ENST00000536717 ADORA1P30542 326 aa22.15■■□□□ 1.14
TNFRSF1A-209ENST00000536717 CTCFP49711 727 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF1A-209ENST00000536717 VEZTQ9HBM0 779 aa22.15■■□□□ 1.14
TNFRSF1A-209ENST00000536717 PHKA1P46020 1223 aa22.14■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TIMM10P62072 90 aa22.14■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TFCP2Q12800 502 aa22.14■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SPDYE2Q495Y8 402 aa22.14■■□□□ 1.13
TNFRSF1A-209ENST00000536717 CCDC102AQ96A19 550 aa22.14■■□□□ 1.13
TNFRSF1A-209ENST00000536717 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms