RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
YBX3-205ENST00000536107 ASIC4Q96FT7 647 aa6.71□□□□□ -1.34
YBX3-205ENST00000536107 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
YBX3-205ENST00000536107 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
YBX3-205ENST00000536107 LOC102724428A0A0B4J2F2 783 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 SIK1P57059 783 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 CBLL1Q75N03 491 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 CLEC10AQ8IUN9 316 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 SHKBP1Q8TBC3 707 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 MYRFLQ96LU7 910 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 NUP153P49790 1475 aaKnown RBP6.7□□□□□ -1.34
YBX3-205ENST00000536107 CDK12Q9NYV4 1490 aaPredicted RBP6.7□□□□□ -1.34
YBX3-205ENST00000536107 AFF2P51816 1311 aa6.7□□□□□ -1.34
YBX3-205ENST00000536107 TNRQ92752 1358 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 NEURL4Q96JN8 1562 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 REREQ9P2R6 1566 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 RAPGEF6Q8TEU7 1601 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 ZNF142P52746 1687 aaPredicted RBP6.69□□□□□ -1.34
YBX3-205ENST00000536107 MLH3Q9UHC1 1453 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 PALM3A6NDB9 673 aaPredicted RBP6.69□□□□□ -1.34
YBX3-205ENST00000536107 ARSDP51689 593 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 SIX5Q8N196 739 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 SCG3Q8WXD2 468 aaKnown RBP6.69□□□□□ -1.34
YBX3-205ENST00000536107 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
YBX3-205ENST00000536107 DNMT1P26358 1616 aaKnown RBP6.68□□□□□ -1.34
YBX3-205ENST00000536107 RGS12O14924 1447 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 J3QW42 95 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 WISP1O95388 367 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 GHRHP01286 108 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 GALNT11Q8NCW6 608 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 FAM83CQ9BQN1 747 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
YBX3-205ENST00000536107 ARHGAP5Q13017 1502 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 CDK13Q14004 1512 aaKnown RBP6.67□□□□□ -1.34
YBX3-205ENST00000536107 FAM135AQ9P2D6 1515 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 EGFRP00533 1210 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 HOXD8P13378 290 aaPredicted RBP6.67□□□□□ -1.34
YBX3-205ENST00000536107 ACAD11Q709F0 780 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
YBX3-205ENST00000536107 FAM20CQ8IXL6 584 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 OGFOD1Q8N543 542 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 C8orf37Q96NL8 207 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 LRP6O75581 1613 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 ABCA6Q8N139 1617 aa6.67□□□□□ -1.34
YBX3-205ENST00000536107 ABCC1P33527 1531 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 KDM5CP41229 1560 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 DKK1O94907 266 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 JUNBP17275 347 aaPredicted RBP6.66□□□□□ -1.34
YBX3-205ENST00000536107 ITGB5P18084 799 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
YBX3-205ENST00000536107 FBLN7Q53RD9 439 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 PIM2Q9P1W9 311 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 ANGEL1Q9UNK9 670 aaKnown RBP6.66□□□□□ -1.34
YBX3-205ENST00000536107 CDK11AQ9UQ88 783 aaPredicted RBP6.66□□□□□ -1.34
YBX3-205ENST00000536107 RBM19Q9Y4C8 960 aaKnown RBP6.66□□□□□ -1.34
YBX3-205ENST00000536107 TMEM94Q12767 1356 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 MED14O60244 1454 aa6.66□□□□□ -1.34
YBX3-205ENST00000536107 SYNMO15061 1565 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 MROH2AA6NES4 1674 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 USP17L3A6NCW0 530 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 USP17L4A6NCW7 530 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 PSAPP07602 524 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 HOXA10P31260 410 aaPredicted RBP6.65□□□□□ -1.34
YBX3-205ENST00000536107 SOX18P35713 384 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 SF3B2Q13435 895 aaKnown RBP6.65□□□□□ -1.34
YBX3-205ENST00000536107 USP17L2Q6R6M4 530 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 KIAA1211Q6ZU35 1233 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 USP17L1Q7RTZ2 530 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 TRIM33Q9UPN9 1127 aa6.65□□□□□ -1.34
YBX3-205ENST00000536107 SPAG9O60271 1321 aaKnown RBP6.65□□□□□ -1.35
YBX3-205ENST00000536107 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 TM4SF5O14894 197 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 FBXL18Q96ME1 805 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 KCNK4Q9NYG8 393 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 KLK14Q9P0G3 267 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 ZNF777Q9ULD5 760 aaPredicted RBP6.64□□□□□ -1.35
YBX3-205ENST00000536107 CLTCQ00610 1675 aaKnown RBP6.64□□□□□ -1.35
YBX3-205ENST00000536107 CTTNBP2Q8WZ74 1663 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 ROBO1Q9Y6N7 1651 aa6.64□□□□□ -1.35
YBX3-205ENST00000536107 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
YBX3-205ENST00000536107 MICAL2O94851 1124 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 PRNPP04156 253 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 MSH6P52701 1360 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 MSMPQ1L6U9 139 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 LRRC9Q6ZRR7 1453 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.63□□□□□ -1.35
YBX3-205ENST00000536107 TXNDC2Q86VQ3 553 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 NSUN5Q96P11 429 aaKnown RBP6.63□□□□□ -1.35
YBX3-205ENST00000536107 KDM5DQ9BY66 1539 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
YBX3-205ENST00000536107 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 MMP20O60882 483 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 BMP3P12645 472 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 DEFB132Q7Z7B7 95 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 C14orf37Q86TY3 774 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 KCNF1Q9H3M0 494 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms