RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 IQSEC3Q9UPP2 1182 aaPredicted RBP15.81■□□□□ 0.12
VPS37C-203ENST00000536000 JAG2Q9Y219 1238 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 PSME4Q14997 1843 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 FAM205AQ6ZU69 1335 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 TRAF5O00463 557 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 FMR1Q06787 632 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS37C-203ENST00000536000 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
VPS37C-203ENST00000536000 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 POLR2AP24928 1970 aaKnown RBP15.8■□□□□ 0.12
VPS37C-203ENST00000536000 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
VPS37C-203ENST00000536000 F8W031 263 aaPredicted RBP15.79■□□□□ 0.12
VPS37C-203ENST00000536000 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
VPS37C-203ENST00000536000 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
VPS37C-203ENST00000536000 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
VPS37C-203ENST00000536000 CERS5Q8N5B7 392 aa15.79■□□□□ 0.12
VPS37C-203ENST00000536000 DDX19BQ9UMR2 479 aa15.79■□□□□ 0.12
VPS37C-203ENST00000536000 AKAP2Q9Y2D5 859 aa15.79■□□□□ 0.12
VPS37C-203ENST00000536000 TIMM10P62072 90 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 TFCP2Q12800 502 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 POLA2Q14181 598 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 MFSD14BQ5SR56 506 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 SULF1Q8IWU6 871 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 KLRG1Q96E93 195 aa15.78■□□□□ 0.12
VPS37C-203ENST00000536000 GNL3LQ9NVN8 582 aaKnown RBP15.78■□□□□ 0.12
VPS37C-203ENST00000536000 WNT10BO00744 389 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.12
VPS37C-203ENST00000536000 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
VPS37C-203ENST00000536000 DLGAP5Q15398 846 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 ANGEL2Q5VTE6 544 aaKnown RBP15.77■□□□□ 0.12
VPS37C-203ENST00000536000 CST9Q5W186 159 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 GGA3Q9NZ52 723 aa15.77■□□□□ 0.12
VPS37C-203ENST00000536000 ASTN2O75129 1339 aaPredicted RBP15.76■□□□□ 0.11
VPS37C-203ENST00000536000 CELF2O95319 508 aaKnown RBP15.76■□□□□ 0.11
VPS37C-203ENST00000536000 NEUROD6Q96NK8 337 aa15.76■□□□□ 0.11
VPS37C-203ENST00000536000 ZNF408Q9H9D4 720 aa15.76■□□□□ 0.11
VPS37C-203ENST00000536000 MKRN1Q9UHC7 482 aaKnown RBP15.76■□□□□ 0.11
VPS37C-203ENST00000536000 ABT1Q9ULW3 272 aaKnown RBP15.76■□□□□ 0.11
VPS37C-203ENST00000536000 A0A1B0GUL7 405 aa15.75■□□□□ 0.11
VPS37C-203ENST00000536000 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
VPS37C-203ENST00000536000 DEFB115Q30KQ5 88 aa15.75■□□□□ 0.11
VPS37C-203ENST00000536000 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
VPS37C-203ENST00000536000 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
VPS37C-203ENST00000536000 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
VPS37C-203ENST00000536000 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 ADORA1P30542 326 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 DLK2Q6UY11 383 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
VPS37C-203ENST00000536000 MTMR14Q8NCE2 650 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 WDR66Q8TBY9 1149 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 XAGE2Q96GT9 111 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 ZBTB40Q9NUA8 1239 aa15.74■□□□□ 0.11
VPS37C-203ENST00000536000 NOP58Q9Y2X3 529 aaKnown RBP15.74■□□□□ 0.11
VPS37C-203ENST00000536000 MYO1BO43795 1136 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 PHKA1P46020 1223 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 CCDC102BQ68D86 513 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 ZBED3Q96IU2 234 aaPredicted RBP15.73■□□□□ 0.11
VPS37C-203ENST00000536000 DENND2AQ9ULE3 1009 aa15.73■□□□□ 0.11
VPS37C-203ENST00000536000 SEMA3EO15041 775 aa15.72■□□□□ 0.11
VPS37C-203ENST00000536000 C2orf69Q8N8R5 385 aa15.72■□□□□ 0.11
VPS37C-203ENST00000536000 PRMT6Q96LA8 375 aaPredicted RBP15.72■□□□□ 0.11
VPS37C-203ENST00000536000 SCAF8Q9UPN6 1271 aaKnown RBP15.72■□□□□ 0.11
VPS37C-203ENST00000536000 SUGT1Q9Y2Z0 365 aa15.72■□□□□ 0.11
VPS37C-203ENST00000536000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.72■□□□□ 0.11
VPS37C-203ENST00000536000 TRPM7Q96QT4 1865 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 RASSF10A6NK89 507 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 HMMRO75330 724 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 HDLBPQ00341 1268 aaKnown RBP15.71■□□□□ 0.11
VPS37C-203ENST00000536000 GRIK5Q16478 980 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 APOBEC3FQ8IUX4 373 aaKnown RBP15.71■□□□□ 0.11
VPS37C-203ENST00000536000 JMYQ8N9B5 988 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 CDCA5Q96FF9 252 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 MRIQ9BWK5 157 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 GPR108Q9NPR9 543 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 SERPINA10Q9UK55 444 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 PCDHAC2Q9Y5I4 1007 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 TLL2Q9Y6L7 1015 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 CNTNAP1P78357 1384 aa15.71■□□□□ 0.11
VPS37C-203ENST00000536000 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.1
VPS37C-203ENST00000536000 CRKP46108 304 aa15.7■□□□□ 0.1
VPS37C-203ENST00000536000 VEGFBP49765 207 aa15.7■□□□□ 0.1
VPS37C-203ENST00000536000 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
VPS37C-203ENST00000536000 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
VPS37C-203ENST00000536000 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
VPS37C-203ENST00000536000 MAST3O60307 1309 aa15.69■□□□□ 0.1
VPS37C-203ENST00000536000 ZBTB22O15209 634 aa15.69■□□□□ 0.1
VPS37C-203ENST00000536000 TNNI3KQ59H18 835 aa15.69■□□□□ 0.1
VPS37C-203ENST00000536000 PRAMEF18Q5VWM3 479 aa15.69■□□□□ 0.1
VPS37C-203ENST00000536000 SAPCD2Q86UD0 394 aa15.69■□□□□ 0.1
VPS37C-203ENST00000536000 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms