RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SPEF2Q9C093 1822 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 ZNF521Q96K83 1311 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 GRM8O00222 908 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 DLGAP5Q15398 846 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 KIAA0825Q8IV33 1275 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 MRIQ9BWK5 157 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 PCDH10Q9P2E7 1040 aa14.26□□□□□ -0.13
CLSTN3-206ENST00000535668 MANSC4A6NHS7 340 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 ZBTB22O15209 634 aa14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 EXOSC9Q06265 439 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 RABL6Q3YEC7 729 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 SUPT20HL1Q3ZLR7 823 aa14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 FBXO46Q6PJ61 603 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 SERPINA10Q9UK55 444 aa14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 HPS5Q9UPZ3 1129 aa14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
CLSTN3-206ENST00000535668 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 KAZALD1Q96I82 304 aa14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 KIAA0100Q14667 2235 aaKnown RBP14.24□□□□□ -0.13
CLSTN3-206ENST00000535668 KIF16BQ96L93 1317 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 MYO1BO43795 1136 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 KCNJ4P48050 445 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 LDHAL6AQ6ZMR3 332 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 RIPOR2Q9Y4F9 1068 aa14.23□□□□□ -0.13
CLSTN3-206ENST00000535668 FKTNO75072 461 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 TAF5LO75529 589 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 TNFAIP1Q13829 316 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 FAM84BQ96KN1 310 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
CLSTN3-206ENST00000535668 F6X3S4 739 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SNAP23O00161 211 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 CFAP100Q494V2 611 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 FKBP1CQ5VVH2 108 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 FBXO33Q7Z6M2 555 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SLC10A4Q96EP9 437 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 TEPSINQ96N21 525 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SRCIN1Q9C0H9 1055 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SCAF8Q9UPN6 1271 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 SUGT1Q9Y2Z0 365 aa14.21□□□□□ -0.13
CLSTN3-206ENST00000535668 MROH5Q6ZUA9 1318 aa14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 USP2O75604 605 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 TTLL12Q14166 644 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 PRPF38BQ5VTL8 546 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 VGLL2Q8N8G2 317 aa14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 WNK4Q96J92 1243 aa14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 R3HDMLQ9H3Y0 253 aa14.2□□□□□ -0.14
CLSTN3-206ENST00000535668 MKI67P46013 3256 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-206ENST00000535668 IREB2P48200 963 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-206ENST00000535668 HELBQ8NG08 1087 aaPredicted RBP14.19□□□□□ -0.14
CLSTN3-206ENST00000535668 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 CENPFP49454 3210 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 IGF2BP3O00425 579 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 HIBADHP31937 336 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 RASA3Q14644 834 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 MFSD14BQ5SR56 506 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 NBPF12Q5TAG4 269 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 TBC1D22AQ8WUA7 517 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 MS4A4AQ96JQ5 239 aa14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-206ENST00000535668 PTPRCP08575 1304 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 AOX1Q06278 1338 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 ANP32CO43423 234 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 OTUD7BQ6GQQ9 843 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 ZNF594Q96JF6 807 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 CLMNQ96JQ2 1002 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 ZNF70Q9UC06 446 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 PCDHAC2Q9Y5I4 1007 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 BRCA2P51587 3418 aa14.17□□□□□ -0.14
CLSTN3-206ENST00000535668 PDE8BO95263 885 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 GJA5P36382 358 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 SOX10P56693 466 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 OTOP1Q7RTM1 612 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 FAM83AQ86UY5 434 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 ARMC5Q96C12 935 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
CLSTN3-206ENST00000535668 PTPN18Q99952 460 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms