RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 PTPRCP08575 1304 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 IL1R1P14778 569 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 KLRK1P26718 216 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 TNNI2P48788 182 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 UBE4AQ14139 1066 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 CTU1Q7Z7A3 348 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 SLC10A4Q96EP9 437 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-205ENST00000535452 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-205ENST00000535452 PKN2Q16513 984 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-205ENST00000535452 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
CLSTN3-205ENST00000535452 INHBEP58166 350 aa16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 METTL24Q5JXM2 366 aa16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 MFSD14BQ5SR56 506 aa16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
CLSTN3-205ENST00000535452 AKAP11Q9UKA4 1901 aa16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 WDHD1O75717 1129 aaPredicted RBP16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 MOB2Q70IA6 237 aa16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
CLSTN3-205ENST00000535452 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
CLSTN3-205ENST00000535452 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
CLSTN3-205ENST00000535452 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
CLSTN3-205ENST00000535452 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
CLSTN3-205ENST00000535452 SNAP23O00161 211 aa16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 MAST3O60307 1309 aa16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.24
CLSTN3-205ENST00000535452 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 GYG1P46976 350 aa16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 TM4SF4P48230 202 aa16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 ANKRD13AQ8IZ07 590 aa16.57■□□□□ 0.24
CLSTN3-205ENST00000535452 FAM205AQ6ZU69 1335 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 FKTNO75072 461 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 RASA3Q14644 834 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 CERS5Q8N5B7 392 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
CLSTN3-205ENST00000535452 UTYO14607 1347 aa16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 SLC5A1P13866 664 aa16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 ARHGEF6Q15052 776 aa16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 ZNF296Q8WUU4 475 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 PRMT6Q96LA8 375 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 CSADQ9Y600 493 aa16.55■□□□□ 0.24
CLSTN3-205ENST00000535452 GPR25O00155 361 aa16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 PDE8BO95263 885 aa16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 RGS19P49795 217 aa16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
CLSTN3-205ENST00000535452 CRKP46108 304 aa16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 HDLBPQ00341 1268 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 FAM84BQ96KN1 310 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 PUS3Q9BZE2 481 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 ZNF70Q9UC06 446 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
CLSTN3-205ENST00000535452 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
CLSTN3-205ENST00000535452 WNK4Q96J92 1243 aa16.52■□□□□ 0.24
CLSTN3-205ENST00000535452 TDRD3Q9H7E2 651 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-205ENST00000535452 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.24
CLSTN3-205ENST00000535452 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms