RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
CDCA3-204ENST00000535406 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 USP48Q86UV5 1035 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 MEIS3Q99687 375 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 ADM5C9JUS6 153 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 MMP14P50281 582 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 SCARF1Q14162 830 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
CDCA3-204ENST00000535406 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
CDCA3-204ENST00000535406 TLL2Q9Y6L7 1015 aa11.8□□□□□ -0.52
CDCA3-204ENST00000535406 POLR2AP24928 1970 aaKnown RBP11.8□□□□□ -0.52
CDCA3-204ENST00000535406 ASTN2O75129 1339 aaPredicted RBP11.8□□□□□ -0.52
CDCA3-204ENST00000535406 THSD7BQ9C0I4 1608 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 PDE8BO95263 885 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 GNAI3P08754 354 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
CDCA3-204ENST00000535406 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
CDCA3-204ENST00000535406 HIBADHP31937 336 aaKnown RBP11.79□□□□□ -0.52
CDCA3-204ENST00000535406 GYG1P46976 350 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
CDCA3-204ENST00000535406 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 JAG2Q9Y219 1238 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
CDCA3-204ENST00000535406 EYA2O00167 538 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 WNT10BO00744 389 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 SASH1O94885 1247 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 ECE1P42892 770 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
CDCA3-204ENST00000535406 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
CDCA3-204ENST00000535406 GRM1Q13255 1194 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
CDCA3-204ENST00000535406 NBPF9Q3BBW0 867 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 DLK2Q6UY11 383 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
CDCA3-204ENST00000535406 WDR33Q9C0J8 1336 aaKnown RBP11.78□□□□□ -0.52
CDCA3-204ENST00000535406 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
CDCA3-204ENST00000535406 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
CDCA3-204ENST00000535406 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
CDCA3-204ENST00000535406 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
CDCA3-204ENST00000535406 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
CDCA3-204ENST00000535406 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
CDCA3-204ENST00000535406 HHIPL1Q96JK4 782 aa11.77□□□□□ -0.53
CDCA3-204ENST00000535406 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
CDCA3-204ENST00000535406 SIL1Q9H173 461 aa11.77□□□□□ -0.53
CDCA3-204ENST00000535406 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 FRAT2O75474 233 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-204ENST00000535406 CIAO1O76071 339 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 SLC5A1P13866 664 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 CYP4F22Q6NT55 531 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 C2orf69Q8N8R5 385 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 GBA2Q9HCG7 927 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-204ENST00000535406 PAPPA2Q9BXP8 1791 aa11.76□□□□□ -0.53
CDCA3-204ENST00000535406 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 GNAI2P04899 355 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 FGFR2P21802 821 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 HUNKP57058 714 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 FBXO33Q7Z6M2 555 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
CDCA3-204ENST00000535406 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 LPIN2Q92539 896 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
CDCA3-204ENST00000535406 SCAF8Q9UPN6 1271 aaKnown RBP11.75□□□□□ -0.53
CDCA3-204ENST00000535406 IQSEC3Q9UPP2 1182 aaPredicted RBP11.75□□□□□ -0.53
CDCA3-204ENST00000535406 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 BCAMP50895 628 aa11.74□□□□□ -0.53
CDCA3-204ENST00000535406 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 CHAF1AQ13111 956 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 MTX1Q13505 466 aa11.74□□□□□ -0.53
CDCA3-204ENST00000535406 CFAP100Q494V2 611 aa11.74□□□□□ -0.53
CDCA3-204ENST00000535406 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
CDCA3-204ENST00000535406 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 CEP126Q9P2H0 1117 aa11.74□□□□□ -0.53
CDCA3-204ENST00000535406 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
CDCA3-204ENST00000535406 MYO1BO43795 1136 aa11.73□□□□□ -0.53
CDCA3-204ENST00000535406 RBM5P52756 815 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDCA3-204ENST00000535406 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
CDCA3-204ENST00000535406 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
CDCA3-204ENST00000535406 DZIP1LQ8IYY4 767 aaKnown RBP11.73□□□□□ -0.53
CDCA3-204ENST00000535406 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
CDCA3-204ENST00000535406 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms