RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 EPS15P42566 896 aa25.28■■□□□ 1.64
CHFR-209ENST00000535181 PHKA1P46020 1223 aa25.28■■□□□ 1.64
CHFR-209ENST00000535181 FBXW7Q969H0 707 aa25.28■■□□□ 1.64
CHFR-209ENST00000535181 ADARB2Q9NS39 739 aaKnown RBP25.28■■□□□ 1.64
CHFR-209ENST00000535181 CNOT7Q9UIV1 285 aaKnown RBP25.28■■□□□ 1.64
CHFR-209ENST00000535181 PDS5AQ29RF7 1337 aaKnown RBP25.28■■□□□ 1.64
CHFR-209ENST00000535181 ADAMTSL1Q8N6G6 1762 aa25.27■■□□□ 1.64
CHFR-209ENST00000535181 PNMA8AQ86V59 439 aaPredicted RBP25.27■■□□□ 1.64
CHFR-209ENST00000535181 TBC1D22AQ8WUA7 517 aa25.27■■□□□ 1.64
CHFR-209ENST00000535181 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
CHFR-209ENST00000535181 H7C1D1 291 aa25.26■■□□□ 1.63
CHFR-209ENST00000535181 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
CHFR-209ENST00000535181 ZNF280AP59817 542 aaPredicted RBP25.26■■□□□ 1.63
CHFR-209ENST00000535181 USP50Q70EL3 339 aaPredicted RBP25.26■■□□□ 1.63
CHFR-209ENST00000535181 MICALL2Q8IY33 904 aa25.26■■□□□ 1.63
CHFR-209ENST00000535181 CLASRPQ8N2M8 674 aaKnown RBP25.26■■□□□ 1.63
CHFR-209ENST00000535181 DENND2AQ9ULE3 1009 aa25.26■■□□□ 1.63
CHFR-209ENST00000535181 COL1A1P02452 1464 aaPredicted RBP25.26■■□□□ 1.63
CHFR-209ENST00000535181 USP17L8P0C7I0 530 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 GORABQ5T7V8 394 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
CHFR-209ENST00000535181 CERS5Q8N5B7 392 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 MXD3Q9BW11 206 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 LRRCC1Q9C099 1032 aa25.25■■□□□ 1.63
CHFR-209ENST00000535181 DBNLQ9UJU6 430 aaKnown RBP25.25■■□□□ 1.63
CHFR-209ENST00000535181 IQSEC3Q9UPP2 1182 aaPredicted RBP25.25■■□□□ 1.63
CHFR-209ENST00000535181 TOMM70O94826 608 aa25.24■■□□□ 1.63
CHFR-209ENST00000535181 ARID4AP29374 1257 aaPredicted RBP25.24■■□□□ 1.63
CHFR-209ENST00000535181 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
CHFR-209ENST00000535181 MFSD14BQ5SR56 506 aa25.24■■□□□ 1.63
CHFR-209ENST00000535181 WDR66Q8TBY9 1149 aa25.24■■□□□ 1.63
CHFR-209ENST00000535181 ZNF512BQ96KM6 892 aaPredicted RBP25.24■■□□□ 1.63
CHFR-209ENST00000535181 IL1RAPL2Q9NP60 686 aa25.24■■□□□ 1.63
CHFR-209ENST00000535181 SALL1Q9NSC2 1324 aa25.23■■□□□ 1.63
CHFR-209ENST00000535181 UQCRFS1P1P0C7P4 283 aa25.23■■□□□ 1.63
CHFR-209ENST00000535181 AACSQ86V21 672 aa25.23■■□□□ 1.63
CHFR-209ENST00000535181 RBM46Q8TBY0 533 aaKnown RBP25.23■■□□□ 1.63
CHFR-209ENST00000535181 SUGT1Q9Y2Z0 365 aa25.23■■□□□ 1.63
CHFR-209ENST00000535181 APBB1O00213 710 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 CHAF1AQ13111 956 aaPredicted RBP25.22■■□□□ 1.63
CHFR-209ENST00000535181 RASGRF1Q13972 1273 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 CCDC158Q5M9N0 1113 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 OGFOD1Q8N543 542 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 GCC1Q96CN9 775 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 CCDC8Q9H0W5 538 aaPredicted RBP25.22■■□□□ 1.63
CHFR-209ENST00000535181 JAG2Q9Y219 1238 aa25.22■■□□□ 1.63
CHFR-209ENST00000535181 SHTN1A0MZ66 631 aa25.21■■□□□ 1.63
CHFR-209ENST00000535181 LDHDQ86WU2 507 aa25.21■■□□□ 1.63
CHFR-209ENST00000535181 RWDD1Q9H446 243 aaPredicted RBP25.21■■□□□ 1.63
CHFR-209ENST00000535181 TLR7Q9NYK1 1049 aaKnown RBP25.21■■□□□ 1.63
CHFR-209ENST00000535181 KIAA0825Q8IV33 1275 aa25.2■■□□□ 1.62
CHFR-209ENST00000535181 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
CHFR-209ENST00000535181 TRPM4Q8TD43 1214 aa25.19■■□□□ 1.62
CHFR-209ENST00000535181 ZC3H15Q8WU90 426 aaKnown RBP25.19■■□□□ 1.62
CHFR-209ENST00000535181 MYOZ2Q9NPC6 264 aa25.19■■□□□ 1.62
CHFR-209ENST00000535181 IFIT2P09913 472 aaKnown RBP25.18■■□□□ 1.62
CHFR-209ENST00000535181 KIF4BQ2VIQ3 1234 aa25.18■■□□□ 1.62
CHFR-209ENST00000535181 EAPPQ56P03 285 aaPredicted RBP25.18■■□□□ 1.62
CHFR-209ENST00000535181 TTC39AQ5SRH9 613 aa25.18■■□□□ 1.62
CHFR-209ENST00000535181 SAMD7Q7Z3H4 446 aa25.18■■□□□ 1.62
CHFR-209ENST00000535181 ZGPATQ8N5A5 531 aaKnown RBP25.18■■□□□ 1.62
CHFR-209ENST00000535181 HMG20BQ9P0W2 317 aa25.18■■□□□ 1.62
CHFR-209ENST00000535181 AKAP11Q9UKA4 1901 aa25.18■■□□□ 1.62
CHFR-209ENST00000535181 POTEIP0CG38 1075 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 POTEJP0CG39 1038 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 MCAMP43121 646 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 HIRAP54198 1017 aaPredicted RBP25.17■■□□□ 1.62
CHFR-209ENST00000535181 SPATA5Q8NB90 893 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 SMC1BQ8NDV3 1235 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 PGAP2Q9UHJ9 254 aa25.17■■□□□ 1.62
CHFR-209ENST00000535181 MAST3O60307 1309 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 EGFRP00533 1210 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 FSTL1Q12841 308 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 TBC1D10BQ4KMP7 808 aaPredicted RBP25.16■■□□□ 1.62
CHFR-209ENST00000535181 CHADLQ6NUI6 762 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 SMC5Q8IY18 1101 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 MTMR14Q8NCE2 650 aa25.16■■□□□ 1.62
CHFR-209ENST00000535181 HDLBPQ00341 1268 aaKnown RBP25.15■■□□□ 1.62
CHFR-209ENST00000535181 SCARF1Q14162 830 aa25.15■■□□□ 1.62
CHFR-209ENST00000535181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.15■■□□□ 1.62
CHFR-209ENST00000535181 MRIQ9BWK5 157 aa25.15■■□□□ 1.62
CHFR-209ENST00000535181 SERPINA10Q9UK55 444 aa25.15■■□□□ 1.62
CHFR-209ENST00000535181 TTF2Q9UNY4 1162 aaKnown RBP25.15■■□□□ 1.62
CHFR-209ENST00000535181 SMARCA5O60264 1052 aaPredicted RBP25.14■■□□□ 1.62
CHFR-209ENST00000535181 ZBED3Q96IU2 234 aaPredicted RBP25.14■■□□□ 1.62
CHFR-209ENST00000535181 F8W031 263 aaPredicted RBP25.13■■□□□ 1.61
CHFR-209ENST00000535181 IGSF3O75054 1194 aa25.13■■□□□ 1.61
CHFR-209ENST00000535181 IGHDP01880 384 aa25.13■■□□□ 1.61
CHFR-209ENST00000535181 GRIK5Q16478 980 aa25.13■■□□□ 1.61
CHFR-209ENST00000535181 RBM26Q5T8P6 1007 aaKnown RBP25.12■■□□□ 1.61
CHFR-209ENST00000535181 SPTY2D1Q68D10 685 aaPredicted RBP25.12■■□□□ 1.61
CHFR-209ENST00000535181 PI16Q6UXB8 463 aa25.12■■□□□ 1.61
CHFR-209ENST00000535181 CLEC11AQ9Y240 323 aa25.12■■□□□ 1.61
CHFR-209ENST00000535181 WNT10BO00744 389 aa25.11■■□□□ 1.61
CHFR-209ENST00000535181 LDHBP07195 334 aaKnown RBP25.11■■□□□ 1.61
CHFR-209ENST00000535181 PRDX5P30044 214 aa25.11■■□□□ 1.61
CHFR-209ENST00000535181 ECM29Q5VYK3 1845 aa25.11■■□□□ 1.61
CHFR-209ENST00000535181 DLGAP5Q15398 846 aa25.1■■□□□ 1.61
CHFR-209ENST00000535181 CFAP100Q494V2 611 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms