RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 COL1A1P02452 1464 aaPredicted RBP16.15■□□□□ 0.18
TMEM258-202ENST00000535042 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
TMEM258-202ENST00000535042 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
TMEM258-202ENST00000535042 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
TMEM258-202ENST00000535042 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
TMEM258-202ENST00000535042 EPS15P42566 896 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 SCARF1Q14162 830 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 GORABQ5T7V8 394 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
TMEM258-202ENST00000535042 GPRC5DQ9NZD1 345 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
TMEM258-202ENST00000535042 ZBTB22O15209 634 aa16.12■□□□□ 0.17
TMEM258-202ENST00000535042 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
TMEM258-202ENST00000535042 GRIK5Q16478 980 aa16.12■□□□□ 0.17
TMEM258-202ENST00000535042 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
TMEM258-202ENST00000535042 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
TMEM258-202ENST00000535042 DPF2Q92785 391 aa16.12■□□□□ 0.17
TMEM258-202ENST00000535042 CNOT7Q9UIV1 285 aaKnown RBP16.12■□□□□ 0.17
TMEM258-202ENST00000535042 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
TMEM258-202ENST00000535042 KIF3CO14782 793 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 SEMA3EO15041 775 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 NEFLP07196 543 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
TMEM258-202ENST00000535042 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
TMEM258-202ENST00000535042 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
TMEM258-202ENST00000535042 FKBP1AP62942 108 aaKnown RBP16.11■□□□□ 0.17
TMEM258-202ENST00000535042 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
TMEM258-202ENST00000535042 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
TMEM258-202ENST00000535042 UQCRFS1P1P0C7P4 283 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 MCAMP43121 646 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
TMEM258-202ENST00000535042 PSME4Q14997 1843 aa16.1■□□□□ 0.17
TMEM258-202ENST00000535042 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 EGFRP00533 1210 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 LMOD1P29536 600 aaPredicted RBP16.09■□□□□ 0.17
TMEM258-202ENST00000535042 EPHX2P34913 555 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 ZNF280AP59817 542 aaPredicted RBP16.09■□□□□ 0.17
TMEM258-202ENST00000535042 SPATA5Q8NB90 893 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 OTUD7AQ8TE49 926 aaPredicted RBP16.09■□□□□ 0.17
TMEM258-202ENST00000535042 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 MYO3BQ8WXR4 1341 aa16.09■□□□□ 0.17
TMEM258-202ENST00000535042 F8W031 263 aaPredicted RBP16.08■□□□□ 0.16
TMEM258-202ENST00000535042 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 HIRAP54198 1017 aaPredicted RBP16.08■□□□□ 0.16
TMEM258-202ENST00000535042 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 TRPM4Q8TD43 1214 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 TBC1D22AQ8WUA7 517 aa16.08■□□□□ 0.16
TMEM258-202ENST00000535042 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
TMEM258-202ENST00000535042 H7C1D1 291 aa16.07■□□□□ 0.16
TMEM258-202ENST00000535042 ZAP70P43403 619 aa16.07■□□□□ 0.16
TMEM258-202ENST00000535042 TBC1D10BQ4KMP7 808 aaPredicted RBP16.07■□□□□ 0.16
TMEM258-202ENST00000535042 RBM26Q5T8P6 1007 aaKnown RBP16.07■□□□□ 0.16
TMEM258-202ENST00000535042 TBC1D9Q6ZT07 1266 aa16.07■□□□□ 0.16
TMEM258-202ENST00000535042 ADARB2Q9NS39 739 aaKnown RBP16.07■□□□□ 0.16
TMEM258-202ENST00000535042 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
TMEM258-202ENST00000535042 SALL1Q9NSC2 1324 aa16.07■□□□□ 0.16
TMEM258-202ENST00000535042 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 PRDX5P30044 214 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 NUCB1Q02818 461 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 TTF2Q9UNY4 1162 aaKnown RBP16.06■□□□□ 0.16
TMEM258-202ENST00000535042 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
TMEM258-202ENST00000535042 CYP2E1P05181 493 aaPredicted RBP16.05■□□□□ 0.16
TMEM258-202ENST00000535042 ATP5JP18859 108 aa16.05■□□□□ 0.16
TMEM258-202ENST00000535042 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
TMEM258-202ENST00000535042 CHD1LQ86WJ1 897 aa16.05■□□□□ 0.16
TMEM258-202ENST00000535042 MYOZ2Q9NPC6 264 aa16.05■□□□□ 0.16
TMEM258-202ENST00000535042 ECHDC1Q9NTX5 307 aa16.05■□□□□ 0.16
TMEM258-202ENST00000535042 SCN4AP35499 1836 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
TMEM258-202ENST00000535042 OGFOD1Q8N543 542 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM258-202ENST00000535042 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 PIH1D3Q9NQM4 214 aaKnown RBP16.04■□□□□ 0.16
TMEM258-202ENST00000535042 ABCF2Q9UG63 623 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
TMEM258-202ENST00000535042 ASTN2O75129 1339 aaPredicted RBP16.03■□□□□ 0.16
TMEM258-202ENST00000535042 AOX1Q06278 1338 aa16.03■□□□□ 0.16
TMEM258-202ENST00000535042 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
TMEM258-202ENST00000535042 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms