RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
COPB1-211ENST00000534234 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.61
COPB1-211ENST00000534234 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
COPB1-211ENST00000534234 SLC10A3P09131 477 aa11.21□□□□□ -0.61
COPB1-211ENST00000534234 HIBADHP31937 336 aaKnown RBP11.21□□□□□ -0.61
COPB1-211ENST00000534234 NF2P35240 595 aa11.21□□□□□ -0.61
COPB1-211ENST00000534234 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
COPB1-211ENST00000534234 TRMT2AQ8IZ69 625 aaKnown RBP11.21□□□□□ -0.61
COPB1-211ENST00000534234 CSRNP1Q96S65 589 aa11.21□□□□□ -0.61
COPB1-211ENST00000534234 JAG2Q9Y219 1238 aa11.21□□□□□ -0.61
COPB1-211ENST00000534234 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 GYG1P46976 350 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
COPB1-211ENST00000534234 APOBEC3FQ8IUX4 373 aaKnown RBP11.2□□□□□ -0.62
COPB1-211ENST00000534234 ANKRD44Q8N8A2 993 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 TDRD7Q8NHU6 1098 aaKnown RBP11.2□□□□□ -0.62
COPB1-211ENST00000534234 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
COPB1-211ENST00000534234 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 MROH5Q6ZUA9 1318 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 TRPA1O75762 1119 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 LRRC24Q50LG9 513 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 DEFB129Q9H1M3 183 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 RNF186Q9NXI6 227 aa11.2□□□□□ -0.62
COPB1-211ENST00000534234 MYO1BO43795 1136 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 RBM5P52756 815 aaKnown RBP eCLIP11.19□□□□□ -0.62
COPB1-211ENST00000534234 PRKG1Q13976 671 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
COPB1-211ENST00000534234 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 PRMT6Q96LA8 375 aaPredicted RBP11.19□□□□□ -0.62
COPB1-211ENST00000534234 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 PCDHAC2Q9Y5I4 1007 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
COPB1-211ENST00000534234 MYH3P11055 1940 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 CLRN2A0PK11 232 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 PDE8BO95263 885 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
COPB1-211ENST00000534234 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 FBXO33Q7Z6M2 555 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
COPB1-211ENST00000534234 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
COPB1-211ENST00000534234 CACNA1FO60840 1977 aa11.17□□□□□ -0.62
COPB1-211ENST00000534234 PTPN12Q05209 780 aaKnown RBP11.17□□□□□ -0.62
COPB1-211ENST00000534234 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
COPB1-211ENST00000534234 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
COPB1-211ENST00000534234 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
COPB1-211ENST00000534234 FRAT2O75474 233 aaPredicted RBP11.16□□□□□ -0.62
COPB1-211ENST00000534234 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 MCOLN1Q9GZU1 580 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 VEZTQ9HBM0 779 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 ANGEL1Q9UNK9 670 aaKnown RBP11.16□□□□□ -0.62
COPB1-211ENST00000534234 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 EYA2O00167 538 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
COPB1-211ENST00000534234 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
COPB1-211ENST00000534234 BCAMP50895 628 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 DGKZQ13574 1117 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 SUPT20HL1Q3ZLR7 823 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 LDLRAD1Q5T700 205 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 API5Q9BZZ5 524 aaKnown RBP11.16□□□□□ -0.62
COPB1-211ENST00000534234 SERPINA10Q9UK55 444 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 FZD1Q9UP38 647 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 PPP2R3BQ9Y5P8 575 aa11.16□□□□□ -0.62
COPB1-211ENST00000534234 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 POLR2AP24928 1970 aaKnown RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 TM4SF4P48230 202 aa11.15□□□□□ -0.62
COPB1-211ENST00000534234 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 AOX1Q06278 1338 aa11.15□□□□□ -0.62
COPB1-211ENST00000534234 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 RASA3Q14644 834 aa11.15□□□□□ -0.62
COPB1-211ENST00000534234 PSME4Q14997 1843 aa11.15□□□□□ -0.62
COPB1-211ENST00000534234 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.62
COPB1-211ENST00000534234 TDRD3Q9H7E2 651 aaKnown RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
COPB1-211ENST00000534234 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
COPB1-211ENST00000534234 PUM3Q15397 648 aaKnown RBP11.14□□□□□ -0.63
COPB1-211ENST00000534234 GRIK5Q16478 980 aa11.14□□□□□ -0.63
COPB1-211ENST00000534234 NBPF12Q5TAG4 269 aaPredicted RBP11.14□□□□□ -0.63
COPB1-211ENST00000534234 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
COPB1-211ENST00000534234 TBC1D22AQ8WUA7 517 aa11.14□□□□□ -0.63
COPB1-211ENST00000534234 ZNF70Q9UC06 446 aaPredicted RBP11.14□□□□□ -0.63
COPB1-211ENST00000534234 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
COPB1-211ENST00000534234 FGFR2P21802 821 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 CRKP46108 304 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 TNFAIP1Q13829 316 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 MAP3K11Q16584 847 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 ATG9AQ7Z3C6 839 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 LPIN2Q92539 896 aa11.13□□□□□ -0.63
COPB1-211ENST00000534234 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms