RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 GJA3Q9Y6H8 435 aa17.21■□□□□ 0.35
CMTM1-218ENST00000533915 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
CMTM1-218ENST00000533915 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
CMTM1-218ENST00000533915 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
CMTM1-218ENST00000533915 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 ERC2O15083 957 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 VIL1P09327 827 aaKnown RBP17.2■□□□□ 0.34
CMTM1-218ENST00000533915 MMP14P50281 582 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 FKBP1AP62942 108 aaKnown RBP17.2■□□□□ 0.34
CMTM1-218ENST00000533915 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-218ENST00000533915 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
CMTM1-218ENST00000533915 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-218ENST00000533915 COL4A5P29400 1685 aa17.2■□□□□ 0.34
CMTM1-218ENST00000533915 PSMD14O00487 310 aa17.19■□□□□ 0.34
CMTM1-218ENST00000533915 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
CMTM1-218ENST00000533915 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
CMTM1-218ENST00000533915 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
CMTM1-218ENST00000533915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
CMTM1-218ENST00000533915 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
CMTM1-218ENST00000533915 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
CMTM1-218ENST00000533915 ATP5JP18859 108 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 MX1P20591 662 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
CMTM1-218ENST00000533915 RASGRF1Q13972 1273 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 SPTY2D1Q68D10 685 aaPredicted RBP17.18■□□□□ 0.34
CMTM1-218ENST00000533915 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 SUGT1Q9Y2Z0 365 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 PSME4Q14997 1843 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 SCN9AQ15858 1988 aa17.18■□□□□ 0.34
CMTM1-218ENST00000533915 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 IGSF3O75054 1194 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 DPF2Q92785 391 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
CMTM1-218ENST00000533915 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
CMTM1-218ENST00000533915 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
CMTM1-218ENST00000533915 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
CMTM1-218ENST00000533915 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
CMTM1-218ENST00000533915 MAST3O60307 1309 aa17.16■□□□□ 0.34
CMTM1-218ENST00000533915 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
CMTM1-218ENST00000533915 H7C1D1 291 aa17.15■□□□□ 0.34
CMTM1-218ENST00000533915 YY1P25490 414 aa17.15■□□□□ 0.34
CMTM1-218ENST00000533915 MCAMP43121 646 aa17.15■□□□□ 0.34
CMTM1-218ENST00000533915 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-218ENST00000533915 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-218ENST00000533915 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-218ENST00000533915 AOX1Q06278 1338 aa17.15■□□□□ 0.34
CMTM1-218ENST00000533915 LDHBP07195 334 aaKnown RBP17.14■□□□□ 0.33
CMTM1-218ENST00000533915 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
CMTM1-218ENST00000533915 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
CMTM1-218ENST00000533915 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
CMTM1-218ENST00000533915 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
CMTM1-218ENST00000533915 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
CMTM1-218ENST00000533915 PDE1AP54750 535 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 TMED8Q6PL24 325 aaPredicted RBP17.13■□□□□ 0.33
CMTM1-218ENST00000533915 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 DNAJC2Q99543 621 aaKnown RBP17.13■□□□□ 0.33
CMTM1-218ENST00000533915 HAUS7Q99871 368 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
CMTM1-218ENST00000533915 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
CMTM1-218ENST00000533915 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
CMTM1-218ENST00000533915 SCARF1Q14162 830 aa17.12■□□□□ 0.33
CMTM1-218ENST00000533915 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
CMTM1-218ENST00000533915 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
CMTM1-218ENST00000533915 GMLQ99445 158 aa17.12■□□□□ 0.33
CMTM1-218ENST00000533915 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
CMTM1-218ENST00000533915 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
CMTM1-218ENST00000533915 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 ZAP70P43403 619 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 GSTO1P78417 241 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
CMTM1-218ENST00000533915 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
CMTM1-218ENST00000533915 OSBPL3Q9H4L5 887 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
CMTM1-218ENST00000533915 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 TTF2Q9UNY4 1162 aaKnown RBP17.11■□□□□ 0.33
CMTM1-218ENST00000533915 SCN4AP35499 1836 aa17.11■□□□□ 0.33
CMTM1-218ENST00000533915 GOLIM4O00461 696 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-218ENST00000533915 SCNN1DP51172 638 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-218ENST00000533915 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 ZNF526Q8TF50 670 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-218ENST00000533915 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
CMTM1-218ENST00000533915 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
CMTM1-218ENST00000533915 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms