RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 CERS5Q8N5B7 392 aa23.22■■□□□ 1.31
HIF3A-216ENST00000533789 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
HIF3A-216ENST00000533789 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
HIF3A-216ENST00000533789 FKBP1AP62942 108 aaKnown RBP23.21■■□□□ 1.31
HIF3A-216ENST00000533789 UBE4AQ14139 1066 aa23.21■■□□□ 1.31
HIF3A-216ENST00000533789 APOBEC3FQ8IUX4 373 aaKnown RBP23.21■■□□□ 1.31
HIF3A-216ENST00000533789 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
HIF3A-216ENST00000533789 MROH5Q6ZUA9 1318 aa23.2■■□□□ 1.3
HIF3A-216ENST00000533789 RASAL3Q86YV0 1011 aa23.2■■□□□ 1.3
HIF3A-216ENST00000533789 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
HIF3A-216ENST00000533789 PUS3Q9BZE2 481 aaKnown RBP23.2■■□□□ 1.3
HIF3A-216ENST00000533789 NF2P35240 595 aa23.19■■□□□ 1.3
HIF3A-216ENST00000533789 KIF23Q02241 960 aaPredicted RBP23.19■■□□□ 1.3
HIF3A-216ENST00000533789 PRAMEF18Q5VWM3 479 aa23.19■■□□□ 1.3
HIF3A-216ENST00000533789 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
HIF3A-216ENST00000533789 MTMR14Q8NCE2 650 aa23.18■■□□□ 1.3
HIF3A-216ENST00000533789 SAGE1Q9NXZ1 904 aa23.18■■□□□ 1.3
HIF3A-216ENST00000533789 RIPOR2Q9Y4F9 1068 aa23.18■■□□□ 1.3
HIF3A-216ENST00000533789 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
HIF3A-216ENST00000533789 CT47B1P0C2W7 299 aaPredicted RBP23.17■■□□□ 1.3
HIF3A-216ENST00000533789 DLGAP5Q15398 846 aa23.17■■□□□ 1.3
HIF3A-216ENST00000533789 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
HIF3A-216ENST00000533789 USP44Q9H0E7 712 aa23.17■■□□□ 1.3
HIF3A-216ENST00000533789 TDRD7Q8NHU6 1098 aaKnown RBP23.16■■□□□ 1.3
HIF3A-216ENST00000533789 ABHD8Q96I13 439 aa23.16■■□□□ 1.3
HIF3A-216ENST00000533789 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
HIF3A-216ENST00000533789 F8W031 263 aaPredicted RBP23.15■■□□□ 1.3
HIF3A-216ENST00000533789 GYG1P46976 350 aa23.15■■□□□ 1.3
HIF3A-216ENST00000533789 TTLL12Q14166 644 aaPredicted RBP23.15■■□□□ 1.3
HIF3A-216ENST00000533789 HIBADHP31937 336 aaKnown RBP23.14■■□□□ 1.29
HIF3A-216ENST00000533789 CFAP100Q494V2 611 aa23.14■■□□□ 1.29
HIF3A-216ENST00000533789 LRRC24Q50LG9 513 aa23.14■■□□□ 1.29
HIF3A-216ENST00000533789 REM2Q8IYK8 340 aaPredicted RBP23.14■■□□□ 1.29
HIF3A-216ENST00000533789 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.29
HIF3A-216ENST00000533789 SSC5DA1L4H1 1573 aa23.14■■□□□ 1.29
HIF3A-216ENST00000533789 SPDYE2BA6NHP3 402 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 UBE2Q2LH0YL09 131 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 MYO1BO43795 1136 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 SPDYE6P0CI01 402 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 METTL24Q5JXM2 366 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 VGLL2Q8N8G2 317 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 CSRNP1Q96S65 589 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 PCDHAC2Q9Y5I4 1007 aa23.13■■□□□ 1.29
HIF3A-216ENST00000533789 RNF186Q9NXI6 227 aa23.12■■□□□ 1.29
HIF3A-216ENST00000533789 PPP2R3BQ9Y5P8 575 aa23.12■■□□□ 1.29
HIF3A-216ENST00000533789 PDE8BO95263 885 aa23.11■■□□□ 1.29
HIF3A-216ENST00000533789 ARMC9Q7Z3E5 817 aa23.11■■□□□ 1.29
HIF3A-216ENST00000533789 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
HIF3A-216ENST00000533789 DEFB129Q9H1M3 183 aa23.11■■□□□ 1.29
HIF3A-216ENST00000533789 TRPA1O75762 1119 aa23.1■■□□□ 1.29
HIF3A-216ENST00000533789 VPS37DQ86XT2 251 aa23.1■■□□□ 1.29
HIF3A-216ENST00000533789 PRMT6Q96LA8 375 aaPredicted RBP23.1■■□□□ 1.29
HIF3A-216ENST00000533789 AK9Q5TCS8 1911 aa23.1■■□□□ 1.29
HIF3A-216ENST00000533789 CLRN2A0PK11 232 aa23.09■■□□□ 1.29
HIF3A-216ENST00000533789 RBM5P52756 815 aaKnown RBP eCLIP23.09■■□□□ 1.29
HIF3A-216ENST00000533789 FBXO33Q7Z6M2 555 aa23.09■■□□□ 1.29
HIF3A-216ENST00000533789 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
HIF3A-216ENST00000533789 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
HIF3A-216ENST00000533789 AOX1Q06278 1338 aa23.08■■□□□ 1.29
HIF3A-216ENST00000533789 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
HIF3A-216ENST00000533789 RFX5P48382 616 aaPredicted RBP23.08■■□□□ 1.29
HIF3A-216ENST00000533789 PRKG1Q13976 671 aa23.08■■□□□ 1.29
HIF3A-216ENST00000533789 CAVIN4Q5BKX8 364 aa23.08■■□□□ 1.29
HIF3A-216ENST00000533789 API5Q9BZZ5 524 aaKnown RBP23.08■■□□□ 1.29
HIF3A-216ENST00000533789 NOB1Q9ULX3 412 aaKnown RBP23.08■■□□□ 1.29
HIF3A-216ENST00000533789 UBTFL1P0CB47 393 aaPredicted RBP23.07■■□□□ 1.28
HIF3A-216ENST00000533789 PTPN12Q05209 780 aaKnown RBP23.07■■□□□ 1.28
HIF3A-216ENST00000533789 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
HIF3A-216ENST00000533789 MCOLN1Q9GZU1 580 aa23.07■■□□□ 1.28
HIF3A-216ENST00000533789 VEZTQ9HBM0 779 aa23.07■■□□□ 1.28
HIF3A-216ENST00000533789 ANGEL1Q9UNK9 670 aaKnown RBP23.07■■□□□ 1.28
HIF3A-216ENST00000533789 MYH2Q9UKX2 1941 aa23.07■■□□□ 1.28
HIF3A-216ENST00000533789 MAP3K11Q16584 847 aa23.06■■□□□ 1.28
HIF3A-216ENST00000533789 LDLRAD1Q5T700 205 aa23.06■■□□□ 1.28
HIF3A-216ENST00000533789 IQSEC3Q9UPP2 1182 aaPredicted RBP23.06■■□□□ 1.28
HIF3A-216ENST00000533789 EYA2O00167 538 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 FGFR2P21802 821 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 DGKZQ13574 1117 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 SPDYE2Q495Y8 402 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 TBC1D22AQ8WUA7 517 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 FZD1Q9UP38 647 aa23.05■■□□□ 1.28
HIF3A-216ENST00000533789 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
HIF3A-216ENST00000533789 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
HIF3A-216ENST00000533789 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
HIF3A-216ENST00000533789 TNFAIP1Q13829 316 aa23.04■■□□□ 1.28
HIF3A-216ENST00000533789 PPP1R12BO60237 982 aaPredicted RBP23.03■■□□□ 1.28
HIF3A-216ENST00000533789 CRKP46108 304 aa23.03■■□□□ 1.28
HIF3A-216ENST00000533789 CHAF1AQ13111 956 aaPredicted RBP23.03■■□□□ 1.28
HIF3A-216ENST00000533789 SUPT20HL1Q3ZLR7 823 aa23.03■■□□□ 1.28
HIF3A-216ENST00000533789 DZIP1LQ8IYY4 767 aaKnown RBP23.03■■□□□ 1.28
HIF3A-216ENST00000533789 ZNF70Q9UC06 446 aaPredicted RBP23.03■■□□□ 1.28
HIF3A-216ENST00000533789 FBXO3Q9UK99 471 aa23.03■■□□□ 1.28
HIF3A-216ENST00000533789 TM4SF4P48230 202 aa23.02■■□□□ 1.28
HIF3A-216ENST00000533789 BCAMP50895 628 aa23.02■■□□□ 1.28
HIF3A-216ENST00000533789 SREBF2Q12772 1141 aa23.02■■□□□ 1.28
HIF3A-216ENST00000533789 MKRN3Q13064 507 aaKnown RBP23.02■■□□□ 1.28
HIF3A-216ENST00000533789 ATG9AQ7Z3C6 839 aa23.02■■□□□ 1.28
HIF3A-216ENST00000533789 HDAC5Q9UQL6 1122 aa23.02■■□□□ 1.28
HIF3A-216ENST00000533789 UNCXA6NJT0 531 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms