RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-218ENST00000533761 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
CCDC90B-218ENST00000533761 AOX1Q06278 1338 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 STK25O00506 426 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 LCE2BO14633 110 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 MX1P20591 662 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 TRAF7Q6Q0C0 670 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 LDHAL6AQ6ZMR3 332 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
CCDC90B-218ENST00000533761 PPEF1O14829 653 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 ERC2O15083 957 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 PDE4AP27815 886 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 SP8Q8IXZ3 490 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 SIL1Q9H173 461 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 OSBPL3Q9H4L5 887 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 PA2G4Q9UQ80 394 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-218ENST00000533761 TAF1P21675 1872 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 BRCA1P38398 1863 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 TTC41PQ6P2S7 1318 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 EYA2O00167 538 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 AKAP2Q9Y2D5 859 aa13.36□□□□□ -0.27
CCDC90B-218ENST00000533761 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 C21orf2O43822 256 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 GPR108Q9NPR9 543 aa13.35□□□□□ -0.27
CCDC90B-218ENST00000533761 PDE1AP54750 535 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 TTC22Q5TAA0 569 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 AACSQ86V21 672 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 BACH2Q9BYV9 841 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 MINPP1Q9UNW1 487 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 MROH5Q6ZUA9 1318 aa13.34□□□□□ -0.27
CCDC90B-218ENST00000533761 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 PTPREP23469 700 aa13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 GPR162Q16538 588 aa13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 NSFL1CQ9UNZ2 370 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
CCDC90B-218ENST00000533761 MPNDQ8N594 471 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 XDHP47989 1333 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 PPP1R37O75864 691 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 SASH1O94885 1247 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 CHRNDQ07001 517 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 METTL24Q5JXM2 366 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
CCDC90B-218ENST00000533761 COL4A1P02462 1669 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 TNNI3KQ59H18 835 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 OLFM4Q6UX06 510 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 FPGT-TNNI3KV9GXZ4 949 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 ARFGEF1Q9Y6D6 1849 aa13.31□□□□□ -0.28
CCDC90B-218ENST00000533761 SALL3Q9BXA9 1300 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 CDC45O75419 566 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 PDE8BO95263 885 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 YBX3P16989 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 TFCP2Q12800 502 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 SUPT20HQ8NEM7 779 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
CCDC90B-218ENST00000533761 TAF5LO75529 589 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 KCNJ4P48050 445 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 GPSM2P81274 684 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms