RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 CERS5Q8N5B7 392 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.32
CAPN1-225ENST00000533704 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 CAPN15O75808 1086 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-225ENST00000533704 DLGAP5Q15398 846 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-225ENST00000533704 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-225ENST00000533704 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
CAPN1-225ENST00000533704 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 HSPA8P11142 646 aaKnown RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 MAP2K2P36507 400 aa13.06□□□□□ -0.32
CAPN1-225ENST00000533704 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 SIL1Q9H173 461 aa13.06□□□□□ -0.32
CAPN1-225ENST00000533704 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
CAPN1-225ENST00000533704 MMP14P50281 582 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-225ENST00000533704 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 ZIC5Q96T25 663 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 MEIS3Q99687 375 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
CAPN1-225ENST00000533704 CLRN2A0PK11 232 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 EYA2O00167 538 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 BCAR3O75815 825 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 PDE8BO95263 885 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 NF2P35240 595 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 RFX5P48382 616 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-225ENST00000533704 NOGQ13253 232 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 PRKG1Q13976 671 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 CAVIN4Q5BKX8 364 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
CAPN1-225ENST00000533704 TDRD7Q8NHU6 1098 aaKnown RBP13.04□□□□□ -0.32
CAPN1-225ENST00000533704 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-225ENST00000533704 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 FAM205AQ6ZU69 1335 aa13.04□□□□□ -0.32
CAPN1-225ENST00000533704 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 MYO1BO43795 1136 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 TTF2Q9UNY4 1162 aaKnown RBP13.03□□□□□ -0.32
CAPN1-225ENST00000533704 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
CAPN1-225ENST00000533704 SLC5A1P13866 664 aa13.02□□□□□ -0.33
CAPN1-225ENST00000533704 BCAMP50895 628 aa13.02□□□□□ -0.33
CAPN1-225ENST00000533704 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-225ENST00000533704 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
CAPN1-225ENST00000533704 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-225ENST00000533704 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
CAPN1-225ENST00000533704 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-225ENST00000533704 GNAI3P08754 354 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 TRIM27P14373 513 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 FKBP1BP68106 108 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
CAPN1-225ENST00000533704 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 AOX1Q06278 1338 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
CAPN1-225ENST00000533704 SLC10A3P09131 477 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
CAPN1-225ENST00000533704 GRIK5Q16478 980 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 ATG9AQ7Z3C6 839 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 RASAL3Q86YV0 1011 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 LPIN2Q92539 896 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 FZD1Q9UP38 647 aa13□□□□□ -0.33
CAPN1-225ENST00000533704 COL1A1P02452 1464 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-225ENST00000533704 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 CA12O43570 354 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 CIAO1O76071 339 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 FGFR2P21802 821 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 CRKP46108 304 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
CAPN1-225ENST00000533704 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms