RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 ARID4AP29374 1257 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 GMLQ99445 158 aa20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
PACSIN3-210ENST00000533686 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-210ENST00000533686 TBC1D22AQ8WUA7 517 aa20.17■□□□□ 0.82
PACSIN3-210ENST00000533686 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
PACSIN3-210ENST00000533686 ZBTB12Q9Y330 459 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-210ENST00000533686 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 IQCA1LA6NCM1 817 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 POTECB2RU33 542 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 MMP14P50281 582 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 SCNN1DP51172 638 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 RASGRF1Q13972 1273 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 ZNF784Q8NCA9 323 aaPredicted RBP20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 WDR66Q8TBY9 1149 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 GPBP1L1Q9HC44 474 aaPredicted RBP20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 PSME4Q14997 1843 aa20.16■□□□□ 0.82
PACSIN3-210ENST00000533686 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 CHAF1AQ13111 956 aaPredicted RBP20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 ZNF526Q8TF50 670 aaPredicted RBP20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
PACSIN3-210ENST00000533686 SALL1Q9NSC2 1324 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 CERS5Q8N5B7 392 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 MXD3Q9BW11 206 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 HMG20BQ9P0W2 317 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 JAG2Q9Y219 1238 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
PACSIN3-210ENST00000533686 COL1A1P02452 1464 aaPredicted RBP20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 MCAMP43121 646 aa20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 NUCB1Q02818 461 aa20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 SPATA5Q8NB90 893 aa20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
PACSIN3-210ENST00000533686 H7C1D1 291 aa20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 USP17L8P0C7I0 530 aa20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 EPS15P42566 896 aa20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 MICALL2Q8IY33 904 aa20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
PACSIN3-210ENST00000533686 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 EPHX2P34913 555 aa20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 SCARF1Q14162 830 aa20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 CHD1LQ86WJ1 897 aa20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 OGFOD1Q8N543 542 aa20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 ADARB2Q9NS39 739 aaKnown RBP20.11■□□□□ 0.81
PACSIN3-210ENST00000533686 ATP5JP18859 108 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 KIAA0825Q8IV33 1275 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 GPATCH3Q96I76 525 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 HDAC9Q9UKV0 1011 aa20.1■□□□□ 0.81
PACSIN3-210ENST00000533686 SCN4AP35499 1836 aa20.09■□□□□ 0.81
PACSIN3-210ENST00000533686 PI16Q6UXB8 463 aa20.09■□□□□ 0.81
PACSIN3-210ENST00000533686 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
PACSIN3-210ENST00000533686 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
PACSIN3-210ENST00000533686 MRIQ9BWK5 157 aa20.09■□□□□ 0.81
PACSIN3-210ENST00000533686 TTC41PQ6P2S7 1318 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 SALL3Q9BXA9 1300 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 SHTN1A0MZ66 631 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 KIF3CO14782 793 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 IGSF3O75054 1194 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 SPTY2D1Q68D10 685 aaPredicted RBP20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 CENPQQ7L2Z9 268 aaPredicted RBP20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 LNPKQ9C0E8 428 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 SNRKQ9NRH2 765 aa20.08■□□□□ 0.81
PACSIN3-210ENST00000533686 MAST3O60307 1309 aa20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 ZAP70P43403 619 aa20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 GRIK5Q16478 980 aa20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 OTUD7AQ8TE49 926 aaPredicted RBP20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 MYOZ2Q9NPC6 264 aa20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
PACSIN3-210ENST00000533686 F8W031 263 aaPredicted RBP20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 CYP2E1P05181 493 aaPredicted RBP20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 LDHBP07195 334 aaKnown RBP20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 MX1P20591 662 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 PPP4R2Q9NY27 417 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 ABCF2Q9UG63 623 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 STAP2Q9UGK3 403 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 SERPINA10Q9UK55 444 aa20.06■□□□□ 0.8
PACSIN3-210ENST00000533686 ERC2O15083 957 aa20.05■□□□□ 0.8
PACSIN3-210ENST00000533686 PRDX5P30044 214 aa20.05■□□□□ 0.8
PACSIN3-210ENST00000533686 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
PACSIN3-210ENST00000533686 SAMD7Q7Z3H4 446 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms