RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PTPDC1A2A3K4 754 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 FERP16591 822 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NAPAP54920 295 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NBPF6Q5VWK0 638 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 CCDC129Q6ZRS4 1044 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NBPF5PQ86XG9 351 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-236ENST00000533667 ANKS4BQ8N8V4 417 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NBPF4Q96M43 638 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NYXQ9GZU5 481 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 SAMM50Q9Y512 469 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 TRPM2O94759 1503 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 RIMS2Q9UQ26 1411 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 MAGEB6P1A0A0J9YX57 407 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 SPDYE4A6NLX3 237 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 RAB11FIP4Q86YS3 637 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 TESK2Q96S53 571 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 SWAP70Q9UH65 585 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 V9GYY5 206 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-236ENST00000533667 TEX14Q8IWB6 1497 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 A0A1W2PRG0 241 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 MYL5Q02045 173 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 FAM160A1Q05DH4 1040 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 HEATR3Q7Z4Q2 680 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 CEP63Q96MT8 703 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 LRRC2Q9BYS8 371 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 ABCC1P33527 1531 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 KIF4AO95239 1232 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 ANXA1P04083 346 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 MARCKSP29966 332 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-236ENST00000533667 RFC4P35249 363 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 MNAT1P51948 309 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 MTHFSDQ2M296 383 aaKnown RBP7.93□□□□□ -1.14
CTNND1-236ENST00000533667 ZNF804AQ7Z570 1209 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 SPATA24Q86W54 205 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 NEK11Q8NG66 645 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 DHX58Q96C10 678 aa7.93□□□□□ -1.14
CTNND1-236ENST00000533667 RRP36Q96EU6 259 aaKnown RBP7.93□□□□□ -1.14
CTNND1-236ENST00000533667 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 BICD1Q96G01 975 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 ZNF830Q96NB3 372 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 UTP14AQ9BVJ6 771 aaKnown RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 ATP10BO94823 1461 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 COL17A1Q9UMD9 1497 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 VAV2P52735 878 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 RILPL1Q5EBL4 403 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 PPP1R14CQ8TAE6 165 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 TCEANC2Q96MN5 208 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 IQCGQ9H095 443 aaKnown RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 LUC7L2Q9Y383 392 aaKnown RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 MSH6P52701 1360 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 A6NNZ2 444 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 TNNC1P63316 161 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 MCM6Q14566 821 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 TUBB8Q3ZCM7 444 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 TTC31Q49AM3 519 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 HS2ST1Q7LGA3 356 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 C16orf71Q8IYS4 520 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-236ENST00000533667 FBF1Q8TES7 1133 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 OGFRQ9NZT2 677 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 SYCP2Q9BX26 1530 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 NBPF11Q86T75 865 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 ERO1AQ96HE7 468 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 TMEM87BQ96K49 555 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 SETDB2Q96T68 719 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 IMPG2Q9BZV3 1241 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 ANKRD2Q9GZV1 360 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 MMRN2Q9H8L6 949 aa7.92□□□□□ -1.14
CTNND1-236ENST00000533667 B4DLN1 442 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 EBAG9O00559 213 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 ZBTB7BO15156 539 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 RLBP1P12271 317 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 MRPL12P52815 198 aaKnown RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 DTHD1Q6ZMT9 781 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 PUF60Q9UHX1 559 aaKnown RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 HDAC9Q9UKV0 1011 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 KIF24Q5T7B8 1368 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 A0A1B0GUL7 405 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 RPL13P26373 211 aaKnown RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 PLCD1P51178 756 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 UBXN1Q04323 297 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 IFNKQ9P0W0 207 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 ZMYM3Q14202 1370 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 VWA3BQ502W6 1294 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 CEP128Q6ZU80 1094 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 HDXQ7Z353 690 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 MSANTD4Q8NCY6 345 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 MIPOL1Q8TD10 442 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 JAKMIP2Q96AA8 810 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 MTRF1LQ9UGC7 380 aaKnown RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 ZMYM4Q5VZL5 1548 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 ABCC10Q5T3U5 1492 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 AKR1B15C9JRZ8 316 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-236ENST00000533667 PTGS1P23219 599 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 RPS6KB1P23443 525 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 PPP2R5BQ15173 497 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms