RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 PTPN18Q99952 460 aa13.04□□□□□ -0.32
ATG13-220ENST00000533316 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
ATG13-220ENST00000533316 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
ATG13-220ENST00000533316 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 PRMT6Q96LA8 375 aaPredicted RBP13.03□□□□□ -0.32
ATG13-220ENST00000533316 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 BRCA2P51587 3418 aa13.03□□□□□ -0.32
ATG13-220ENST00000533316 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
ATG13-220ENST00000533316 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
ATG13-220ENST00000533316 CASP7P55210 303 aa13.02□□□□□ -0.33
ATG13-220ENST00000533316 ANKRD2Q9GZV1 360 aa13.02□□□□□ -0.33
ATG13-220ENST00000533316 ELP3Q9H9T3 547 aa13.02□□□□□ -0.33
ATG13-220ENST00000533316 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
ATG13-220ENST00000533316 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
ATG13-220ENST00000533316 PLIN1O60240 522 aa13.01□□□□□ -0.33
ATG13-220ENST00000533316 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
ATG13-220ENST00000533316 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG13-220ENST00000533316 GCKRQ14397 625 aa13.01□□□□□ -0.33
ATG13-220ENST00000533316 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
ATG13-220ENST00000533316 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
ATG13-220ENST00000533316 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
ATG13-220ENST00000533316 CSF1RP07333 972 aa13□□□□□ -0.33
ATG13-220ENST00000533316 SPDYE6P0CI01 402 aa13□□□□□ -0.33
ATG13-220ENST00000533316 ZBTB48P10074 688 aaPredicted RBP13□□□□□ -0.33
ATG13-220ENST00000533316 INHBEP58166 350 aa13□□□□□ -0.33
ATG13-220ENST00000533316 RASA3Q14644 834 aa13□□□□□ -0.33
ATG13-220ENST00000533316 GCC1Q96CN9 775 aa13□□□□□ -0.33
ATG13-220ENST00000533316 ERO1AQ96HE7 468 aa13□□□□□ -0.33
ATG13-220ENST00000533316 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
ATG13-220ENST00000533316 STK31Q9BXU1 1019 aa13□□□□□ -0.33
ATG13-220ENST00000533316 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
ATG13-220ENST00000533316 CEP290O15078 2479 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 FXR1P51114 621 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATG13-220ENST00000533316 SP3Q02447 781 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
ATG13-220ENST00000533316 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
ATG13-220ENST00000533316 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
ATG13-220ENST00000533316 ANKRD18BA2A2Z9 1011 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
ATG13-220ENST00000533316 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
ATG13-220ENST00000533316 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 ARMC5Q96C12 935 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
ATG13-220ENST00000533316 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
ATG13-220ENST00000533316 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
ATG13-220ENST00000533316 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
ATG13-220ENST00000533316 F6X3S4 739 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 IL1R1P14778 569 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 FOXO4P98177 505 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 FLIIQ13045 1269 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 CCDC184Q52MB2 194 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 ANKRD13AQ8IZ07 590 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
ATG13-220ENST00000533316 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
ATG13-220ENST00000533316 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 ZSWIM8A7E2V4 1837 aa12.97□□□□□ -0.33
ATG13-220ENST00000533316 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
ATG13-220ENST00000533316 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 MYO1BO43795 1136 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 MMP14P50281 582 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 FKBP5Q13451 457 aaPredicted RBP12.96□□□□□ -0.33
ATG13-220ENST00000533316 GRIK5Q16478 980 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
ATG13-220ENST00000533316 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 FAM43AQ8N2R8 423 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
ATG13-220ENST00000533316 A0A1B0GUL6 1792 aa12.96□□□□□ -0.34
ATG13-220ENST00000533316 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 GYG1P46976 350 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 CACNB3P54284 484 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
ATG13-220ENST00000533316 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
ATG13-220ENST00000533316 CCL15Q16663 113 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
ATG13-220ENST00000533316 TEPSINQ96N21 525 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
ATG13-220ENST00000533316 TTF2Q9UNY4 1162 aaKnown RBP12.95□□□□□ -0.34
ATG13-220ENST00000533316 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
ATG13-220ENST00000533316 H0YGN5 161 aa12.94□□□□□ -0.34
ATG13-220ENST00000533316 VGLL4Q14135 290 aa12.94□□□□□ -0.34
ATG13-220ENST00000533316 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
ATG13-220ENST00000533316 SLC9C1Q4G0N8 1177 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms