RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 H7C1D1 291 aa14.78□□□□□ -0.04
SSBP3-214ENST00000533209 ZNF280AP59817 542 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-214ENST00000533209 FKBP1AP62942 108 aaKnown RBP14.78□□□□□ -0.04
SSBP3-214ENST00000533209 AAMPQ13685 434 aa14.78□□□□□ -0.04
SSBP3-214ENST00000533209 CCDC102BQ68D86 513 aa14.78□□□□□ -0.04
SSBP3-214ENST00000533209 PNMA8AQ86V59 439 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-214ENST00000533209 RBM46Q8TBY0 533 aaKnown RBP14.78□□□□□ -0.04
SSBP3-214ENST00000533209 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
SSBP3-214ENST00000533209 ZBTB22O15209 634 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 RAB11FIP3O75154 756 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 FRAT2O75474 233 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 EAPPQ56P03 285 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 USP50Q70EL3 339 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 SAMD7Q7Z3H4 446 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 TRPM4Q8TD43 1214 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 EAF2Q96CJ1 260 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-214ENST00000533209 KIF1BPQ96EK5 621 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 DCTPP1Q9H773 170 aa14.77□□□□□ -0.05
SSBP3-214ENST00000533209 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
SSBP3-214ENST00000533209 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 APBB1O00213 710 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 EGFRP00533 1210 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 USP17L8P0C7I0 530 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
SSBP3-214ENST00000533209 LDHDQ86WU2 507 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 DBNDD2Q9BQY9 259 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 IL1RAPL2Q9NP60 686 aa14.76□□□□□ -0.05
SSBP3-214ENST00000533209 GNL3LQ9NVN8 582 aaKnown RBP14.76□□□□□ -0.05
SSBP3-214ENST00000533209 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
SSBP3-214ENST00000533209 SEMA3EO15041 775 aa14.75□□□□□ -0.05
SSBP3-214ENST00000533209 TBC1D10BQ4KMP7 808 aaPredicted RBP14.75□□□□□ -0.05
SSBP3-214ENST00000533209 MFSD14BQ5SR56 506 aa14.75□□□□□ -0.05
SSBP3-214ENST00000533209 GORABQ5T7V8 394 aa14.75□□□□□ -0.05
SSBP3-214ENST00000533209 KIAA0825Q8IV33 1275 aa14.75□□□□□ -0.05
SSBP3-214ENST00000533209 CCDC8Q9H0W5 538 aaPredicted RBP14.75□□□□□ -0.05
SSBP3-214ENST00000533209 DBNLQ9UJU6 430 aaKnown RBP14.75□□□□□ -0.05
SSBP3-214ENST00000533209 ARID4AP29374 1257 aaPredicted RBP14.74□□□□□ -0.05
SSBP3-214ENST00000533209 MMP14P50281 582 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 RASGRF1Q13972 1273 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 GRIK5Q16478 980 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 RBM26Q5T8P6 1007 aaKnown RBP14.74□□□□□ -0.05
SSBP3-214ENST00000533209 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 AACSQ86V21 672 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 TBC1D22AQ8WUA7 517 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 MYOZ2Q9NPC6 264 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 DENND2AQ9ULE3 1009 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 ADAMTSL1Q8N6G6 1762 aa14.74□□□□□ -0.05
SSBP3-214ENST00000533209 PDS5AQ29RF7 1337 aaKnown RBP14.73□□□□□ -0.05
SSBP3-214ENST00000533209 C1QTNF8P60827 252 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 FSTL1Q12841 308 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 HDAC1Q13547 482 aaPredicted RBP14.73□□□□□ -0.05
SSBP3-214ENST00000533209 CLASRPQ8N2M8 674 aaKnown RBP14.73□□□□□ -0.05
SSBP3-214ENST00000533209 OGFOD1Q8N543 542 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 WDR66Q8TBY9 1149 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 PGAP2Q9UHJ9 254 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
SSBP3-214ENST00000533209 F8W031 263 aaPredicted RBP14.72□□□□□ -0.05
SSBP3-214ENST00000533209 UQCRFS1P1P0C7P4 283 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 SCARF1Q14162 830 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 PI16Q6UXB8 463 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
SSBP3-214ENST00000533209 ZBED3Q96IU2 234 aaPredicted RBP14.72□□□□□ -0.05
SSBP3-214ENST00000533209 LRRCC1Q9C099 1032 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 HMG20BQ9P0W2 317 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 HDAC9Q9UKV0 1011 aa14.72□□□□□ -0.05
SSBP3-214ENST00000533209 SALL1Q9NSC2 1324 aa14.71□□□□□ -0.05
SSBP3-214ENST00000533209 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-214ENST00000533209 MCAMP43121 646 aa14.71□□□□□ -0.05
SSBP3-214ENST00000533209 CCDC158Q5M9N0 1113 aa14.71□□□□□ -0.05
SSBP3-214ENST00000533209 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
SSBP3-214ENST00000533209 MAP1SQ66K74 1059 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-214ENST00000533209 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-214ENST00000533209 TTF2Q9UNY4 1162 aaKnown RBP14.71□□□□□ -0.05
SSBP3-214ENST00000533209 SUGT1Q9Y2Z0 365 aa14.71□□□□□ -0.05
SSBP3-214ENST00000533209 ASTN2O75129 1339 aaPredicted RBP14.7□□□□□ -0.06
SSBP3-214ENST00000533209 PRDX5P30044 214 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 NBPF9Q3BBW0 867 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 CNTROBQ8N137 903 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 SPATA5Q8NB90 893 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 MTMR14Q8NCE2 650 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 PCDHAC2Q9Y5I4 1007 aa14.7□□□□□ -0.06
SSBP3-214ENST00000533209 WNT10BO00744 389 aa14.69□□□□□ -0.06
SSBP3-214ENST00000533209 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
SSBP3-214ENST00000533209 IFIT2P09913 472 aaKnown RBP14.69□□□□□ -0.06
SSBP3-214ENST00000533209 DLGAP5Q15398 846 aa14.69□□□□□ -0.06
SSBP3-214ENST00000533209 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
SSBP3-214ENST00000533209 SERPINA10Q9UK55 444 aa14.69□□□□□ -0.06
SSBP3-214ENST00000533209 IGHDP01880 384 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 HDLBPQ00341 1268 aaKnown RBP14.68□□□□□ -0.06
SSBP3-214ENST00000533209 CFAP100Q494V2 611 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 MRIQ9BWK5 157 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 RWDD1Q9H446 243 aaPredicted RBP14.68□□□□□ -0.06
SSBP3-214ENST00000533209 SNRKQ9NRH2 765 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 GGA3Q9NZ52 723 aa14.68□□□□□ -0.06
SSBP3-214ENST00000533209 AOX1Q06278 1338 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms