RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 WDR33Q9C0J8 1336 aaKnown RBP20.76■□□□□ 0.91
PKP3-209ENST00000533069 WNT10BO00744 389 aa20.75■□□□□ 0.91
PKP3-209ENST00000533069 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
PKP3-209ENST00000533069 HSPA1AP0DMV8 641 aaKnown RBP20.75■□□□□ 0.91
PKP3-209ENST00000533069 HSPA1BP0DMV9 641 aaKnown RBP20.75■□□□□ 0.91
PKP3-209ENST00000533069 NBPF9Q3BBW0 867 aa20.75■□□□□ 0.91
PKP3-209ENST00000533069 FBXO33Q7Z6M2 555 aa20.75■□□□□ 0.91
PKP3-209ENST00000533069 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
PKP3-209ENST00000533069 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
PKP3-209ENST00000533069 MTX1Q13505 466 aa20.74■□□□□ 0.91
PKP3-209ENST00000533069 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
PKP3-209ENST00000533069 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
PKP3-209ENST00000533069 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
PKP3-209ENST00000533069 COPRSQ9NQ92 184 aa20.74■□□□□ 0.91
PKP3-209ENST00000533069 FGFR2P21802 821 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 DLK2Q6UY11 383 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 C2orf69Q8N8R5 385 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 MTMR14Q8NCE2 650 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 LPIN2Q92539 896 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 CDCA5Q96FF9 252 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 ZBED3Q96IU2 234 aaPredicted RBP20.73■□□□□ 0.91
PKP3-209ENST00000533069 GBA2Q9HCG7 927 aaPredicted RBP20.73■□□□□ 0.91
PKP3-209ENST00000533069 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
PKP3-209ENST00000533069 GNAI2P04899 355 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 SLC5A1P13866 664 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 IL15P40933 162 aaPredicted RBP20.72■□□□□ 0.91
PKP3-209ENST00000533069 DLGAP5Q15398 846 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 MFSD14BQ5SR56 506 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
PKP3-209ENST00000533069 SIL1Q9H173 461 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 CEP126Q9P2H0 1117 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 JAG2Q9Y219 1238 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 PCNTO95613 3336 aa20.72■□□□□ 0.91
PKP3-209ENST00000533069 SRGAP3O43295 1099 aa20.71■□□□□ 0.91
PKP3-209ENST00000533069 CYP4F22Q6NT55 531 aa20.71■□□□□ 0.91
PKP3-209ENST00000533069 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
PKP3-209ENST00000533069 TMEM57Q8N5G2 664 aa20.71■□□□□ 0.91
PKP3-209ENST00000533069 F8W031 263 aaPredicted RBP20.7■□□□□ 0.9
PKP3-209ENST00000533069 FRAT2O75474 233 aaPredicted RBP20.7■□□□□ 0.9
PKP3-209ENST00000533069 HUNKP57058 714 aa20.7■□□□□ 0.9
PKP3-209ENST00000533069 MAP2K1Q02750 393 aaPredicted RBP20.7■□□□□ 0.9
PKP3-209ENST00000533069 DZIP1LQ8IYY4 767 aaKnown RBP20.7■□□□□ 0.9
PKP3-209ENST00000533069 TBC1D22AQ8WUA7 517 aa20.7■□□□□ 0.9
PKP3-209ENST00000533069 THSD7BQ9C0I4 1608 aa20.7■□□□□ 0.9
PKP3-209ENST00000533069 BCAMP50895 628 aa20.69■□□□□ 0.9
PKP3-209ENST00000533069 FKBP1BP68106 108 aa20.69■□□□□ 0.9
PKP3-209ENST00000533069 ATP2B3Q16720 1220 aa20.69■□□□□ 0.9
PKP3-209ENST00000533069 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
PKP3-209ENST00000533069 PA2G4Q9UQ80 394 aaKnown RBP20.69■□□□□ 0.9
PKP3-209ENST00000533069 COL1A1P02452 1464 aaPredicted RBP20.69■□□□□ 0.9
PKP3-209ENST00000533069 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 MYO1BO43795 1136 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 MAP2K2P36507 400 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 GRM1Q13255 1194 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 CFAP100Q494V2 611 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 SERPINA10Q9UK55 444 aa20.68■□□□□ 0.9
PKP3-209ENST00000533069 TTF2Q9UNY4 1162 aaKnown RBP20.67■□□□□ 0.9
PKP3-209ENST00000533069 IQSEC3Q9UPP2 1182 aaPredicted RBP20.67■□□□□ 0.9
PKP3-209ENST00000533069 NF2P35240 595 aa20.66■□□□□ 0.9
PKP3-209ENST00000533069 CHAF1AQ13111 956 aaPredicted RBP20.66■□□□□ 0.9
PKP3-209ENST00000533069 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
PKP3-209ENST00000533069 NOGQ13253 232 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 RGMBQ6NW40 437 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 CCDC102AQ96A19 550 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 GNL3LQ9NVN8 582 aaKnown RBP20.65■□□□□ 0.9
PKP3-209ENST00000533069 SUGT1Q9Y2Z0 365 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 PPP2R3BQ9Y5P8 575 aa20.65■□□□□ 0.9
PKP3-209ENST00000533069 ARAP2Q8WZ64 1704 aa20.64■□□□□ 0.9
PKP3-209ENST00000533069 MS4A1P11836 297 aa20.64■□□□□ 0.89
PKP3-209ENST00000533069 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.89
PKP3-209ENST00000533069 SCAF8Q9UPN6 1271 aaKnown RBP20.64■□□□□ 0.89
PKP3-209ENST00000533069 AKAP2Q9Y2D5 859 aa20.64■□□□□ 0.89
PKP3-209ENST00000533069 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.89
PKP3-209ENST00000533069 MAST3O60307 1309 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 ZBTB22O15209 634 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 FOXN1O15353 648 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 AOC2O75106 756 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 RLBP1P12271 317 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 CTCFP49711 727 aaPredicted RBP20.63■□□□□ 0.89
PKP3-209ENST00000533069 WDR66Q8TBY9 1149 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 PRMT6Q96LA8 375 aaPredicted RBP20.63■□□□□ 0.89
PKP3-209ENST00000533069 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 PCDHAC2Q9Y5I4 1007 aa20.63■□□□□ 0.89
PKP3-209ENST00000533069 SEMA3EO15041 775 aa20.62■□□□□ 0.89
PKP3-209ENST00000533069 CRKP46108 304 aa20.62■□□□□ 0.89
PKP3-209ENST00000533069 ZNF157P51786 506 aaPredicted RBP20.62■□□□□ 0.89
PKP3-209ENST00000533069 DEFB129Q9H1M3 183 aa20.62■□□□□ 0.89
PKP3-209ENST00000533069 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 CLRN2A0PK11 232 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 ZBTB7BO15156 539 aaPredicted RBP20.61■□□□□ 0.89
PKP3-209ENST00000533069 TNFAIP1Q13829 316 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 PRAMEF18Q5VWM3 479 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 MRIQ9BWK5 157 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 VEZTQ9HBM0 779 aa20.61■□□□□ 0.89
PKP3-209ENST00000533069 FAM155AB1AL88 458 aaPredicted RBP20.6■□□□□ 0.89
PKP3-209ENST00000533069 TFCP2Q12800 502 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms