RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 TAX1BP1Q86VP1 789 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 C2CD5Q86YS7 1000 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 LPIN2Q92539 896 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 PLVAPQ9BX97 442 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 PLEKHG1Q9ULL1 1385 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
COLCA1-203ENST00000532918 TTC12Q9H892 705 aaPredicted RBP12.2□□□□□ -0.46
COLCA1-203ENST00000532918 SPC25Q9HBM1 224 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 VAMP4O75379 141 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 STX1AQ16623 288 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 COMMD10Q9Y6G5 202 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 NMIQ13287 307 aaPredicted RBP12.2□□□□□ -0.46
COLCA1-203ENST00000532918 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 GBP3Q9H0R5 595 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 PAFAH1B1P43034 410 aa12.2□□□□□ -0.46
COLCA1-203ENST00000532918 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
COLCA1-203ENST00000532918 GSTTP1A0A1W2PQM5 241 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 LPXNO60711 386 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 MBD4O95243 580 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 MCM4P33991 863 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 CCDC171Q6TFL3 1326 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 IL13P35225 146 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 UBE2Q2Q8WVN8 375 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
COLCA1-203ENST00000532918 MCM3P25205 808 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 SPAG1Q07617 926 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 MACROD2A1Z1Q3 448 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 Q6ZUG5 572 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
COLCA1-203ENST00000532918 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 HOMER2Q9NSB8 354 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 SDSP20132 328 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 LUZP1Q86V48 1076 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 PNMA2Q9UL42 364 aa12.19□□□□□ -0.46
COLCA1-203ENST00000532918 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 IPO4Q8TEX9 1081 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 DDX17Q92841 729 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 LTKP29376 864 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 SYKP43405 635 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 SMCR8Q8TEV9 937 aaPredicted RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 DDX12PQ92771 950 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 A1BGP04217 495 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 CTAGE1Q96RT6 745 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 RPS8P62241 208 aaKnown RBP12.18□□□□□ -0.46
COLCA1-203ENST00000532918 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
COLCA1-203ENST00000532918 PSMA7O14818 248 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 M0QZ92 97 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 RRAGBQ5VZM2 374 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 NEMFO60524 1076 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 ASIC1P78348 528 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 TESK2Q96S53 571 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 NAA15Q9BXJ9 866 aaKnown RBP12.17□□□□□ -0.46
COLCA1-203ENST00000532918 PANK2Q9BZ23 570 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
COLCA1-203ENST00000532918 SSFA2P28290 1259 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 CEP85Q6P2H3 762 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 ZNF354CQ86Y25 554 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
COLCA1-203ENST00000532918 XAGE2Q96GT9 111 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 TSNARE1Q96NA8 513 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 GSDMDP57764 484 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 TMEM87BQ96K49 555 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 PRPHP41219 470 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 GCKRQ14397 625 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
COLCA1-203ENST00000532918 GRPEL1Q9HAV7 217 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
COLCA1-203ENST00000532918 CEP83Q9Y592 693 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 KAT6BQ8WYB5 2073 aa12.16□□□□□ -0.46
COLCA1-203ENST00000532918 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms