RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	RASSF10	A6NK89	507 aa		28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	SRGAP3	O43295	1099 aa		28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	IL15	P40933	162 aa	Predicted RBP	28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	SULF1	Q8IWU6	871 aa		28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	CERS5	Q8N5B7	392 aa		28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	CEP126	Q9P2H0	1117 aa		28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	PA2G4	Q9UQ80	394 aa	Known RBP	28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	ASTN2	O75129	1339 aa	Predicted RBP	28.6	■■■□□ 2.17
CAPN1-222	ENST00000532285	DEFB115	Q30KQ5	88 aa		28.59	■■■□□ 2.17
CAPN1-222	ENST00000532285	ANGEL2	Q5VTE6	544 aa	Known RBP	28.59	■■■□□ 2.17
CAPN1-222	ENST00000532285	LPIN2	Q92539	896 aa		28.59	■■■□□ 2.17
CAPN1-222	ENST00000532285	PITPNM2	Q9BZ72	1349 aa		28.59	■■■□□ 2.17
CAPN1-222	ENST00000532285	MYH13	Q9UKX3	1938 aa		28.59	■■■□□ 2.17
CAPN1-222	ENST00000532285	ARAP2	Q8WZ64	1704 aa		28.58	■■■□□ 2.17
CAPN1-222	ENST00000532285	SLC5A1	P13866	664 aa		28.58	■■■□□ 2.17
CAPN1-222	ENST00000532285	NBPF9	Q3BBW0	867 aa		28.58	■■■□□ 2.17
CAPN1-222	ENST00000532285	ITPRIP	Q8IWB1	547 aa		28.58	■■■□□ 2.17
CAPN1-222	ENST00000532285	ADM5	C9JUS6	153 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	RLBP1	P12271	317 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	ZNF408	Q9H9D4	720 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	JAG2	Q9Y219	1238 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	TLL2	Q9Y6L7	1015 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	ECM29	Q5VYK3	1845 aa		28.57	■■■□□ 2.16
CAPN1-222	ENST00000532285	WNT10B	O00744	389 aa		28.56	■■■□□ 2.16
CAPN1-222	ENST00000532285	FRAT2	O75474	233 aa	Predicted RBP	28.55	■■■□□ 2.16
CAPN1-222	ENST00000532285	MS4A1	P11836	297 aa		28.55	■■■□□ 2.16
CAPN1-222	ENST00000532285	VEGFB	P49765	207 aa		28.55	■■■□□ 2.16
CAPN1-222	ENST00000532285	BCAM	P50895	628 aa		28.55	■■■□□ 2.16
CAPN1-222	ENST00000532285	MFSD14B	Q5SR56	506 aa		28.55	■■■□□ 2.16
CAPN1-222	ENST00000532285	ATP2B3	Q16720	1220 aa		28.54	■■■□□ 2.16
CAPN1-222	ENST00000532285	DLK2	Q6UY11	383 aa		28.54	■■■□□ 2.16
CAPN1-222	ENST00000532285		F8W031	263 aa	Predicted RBP	28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	ZBTB7B	O15156	539 aa	Predicted RBP	28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	DLGAP5	Q15398	846 aa		28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	MTMR14	Q8NCE2	650 aa		28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	ZBED3	Q96IU2	234 aa	Predicted RBP	28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	RCAN3	Q9UKA8	241 aa		28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.53	■■■□□ 2.16
CAPN1-222	ENST00000532285	SAPCD2	Q86UD0	394 aa		28.52	■■■□□ 2.16
CAPN1-222	ENST00000532285	PNMA6E	A0A0J9YXQ4	647 aa		28.51	■■■□□ 2.15
CAPN1-222	ENST00000532285	TBC1D22A	Q8WUA7	517 aa		28.51	■■■□□ 2.15
CAPN1-222	ENST00000532285	CHAF1A	Q13111	956 aa	Predicted RBP	28.5	■■■□□ 2.15
CAPN1-222	ENST00000532285	PANK1	Q8TE04	598 aa		28.5	■■■□□ 2.15
CAPN1-222	ENST00000532285	CDCA5	Q96FF9	252 aa		28.5	■■■□□ 2.15
CAPN1-222	ENST00000532285	HHIPL1	Q96JK4	782 aa		28.5	■■■□□ 2.15
CAPN1-222	ENST00000532285	WDR33	Q9C0J8	1336 aa	Known RBP	28.49	■■■□□ 2.15
CAPN1-222	ENST00000532285	ECE1	P42892	770 aa		28.49	■■■□□ 2.15
CAPN1-222	ENST00000532285	CFAP100	Q494V2	611 aa		28.49	■■■□□ 2.15
CAPN1-222	ENST00000532285	C2orf69	Q8N8R5	385 aa		28.49	■■■□□ 2.15
CAPN1-222	ENST00000532285	TTF2	Q9UNY4	1162 aa	Known RBP	28.49	■■■□□ 2.15
CAPN1-222	ENST00000532285	ATP8B2	P98198	1209 aa		28.48	■■■□□ 2.15
CAPN1-222	ENST00000532285	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.48	■■■□□ 2.15
CAPN1-222	ENST00000532285	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.48	■■■□□ 2.15
CAPN1-222	ENST00000532285	GBA2	Q9HCG7	927 aa	Predicted RBP	28.48	■■■□□ 2.15
CAPN1-222	ENST00000532285	AKAP2	Q9Y2D5	859 aa		28.48	■■■□□ 2.15
CAPN1-222	ENST00000532285	RBM5	P52756	815 aa	Known RBP eCLIP	28.47	■■■□□ 2.15
CAPN1-222	ENST00000532285	G3BP1	Q13283	466 aa	Known RBP eCLIP	28.47	■■■□□ 2.15
CAPN1-222	ENST00000532285	CAPNS2	Q96L46	248 aa		28.47	■■■□□ 2.15
CAPN1-222	ENST00000532285	GNL3L	Q9NVN8	582 aa	Known RBP	28.47	■■■□□ 2.15
CAPN1-222	ENST00000532285	SERPINA10	Q9UK55	444 aa		28.47	■■■□□ 2.15
CAPN1-222	ENST00000532285	SPDYE2B	A6NHP3	402 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	MYO1B	O43795	1136 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	SPDYE6	P0CI01	402 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	TFCP2	Q12800	502 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	POLA2	Q14181	598 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	C1orf115	Q9H7X2	142 aa		28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	SCAF8	Q9UPN6	1271 aa	Known RBP	28.46	■■■□□ 2.15
CAPN1-222	ENST00000532285	HUNK	P57058	714 aa		28.45	■■■□□ 2.14
CAPN1-222	ENST00000532285	CYP4F22	Q6NT55	531 aa		28.45	■■■□□ 2.14
CAPN1-222	ENST00000532285	SSH3	Q8TE77	659 aa		28.45	■■■□□ 2.14
CAPN1-222	ENST00000532285	PRMT6	Q96LA8	375 aa	Predicted RBP	28.45	■■■□□ 2.14
CAPN1-222	ENST00000532285	TIMM10	P62072	90 aa		28.44	■■■□□ 2.14
CAPN1-222	ENST00000532285	WDR66	Q8TBY9	1149 aa		28.44	■■■□□ 2.14
CAPN1-222	ENST00000532285	SUGT1	Q9Y2Z0	365 aa		28.44	■■■□□ 2.14
CAPN1-222	ENST00000532285	PCDHAC2	Q9Y5I4	1007 aa		28.44	■■■□□ 2.14
CAPN1-222	ENST00000532285	HSPA1A	P0DMV8	641 aa	Known RBP	28.43	■■■□□ 2.14
CAPN1-222	ENST00000532285	HSPA1B	P0DMV9	641 aa	Known RBP	28.43	■■■□□ 2.14
CAPN1-222	ENST00000532285	THSD7B	Q9C0I4	1608 aa		28.43	■■■□□ 2.14
CAPN1-222	ENST00000532285		A0A1B0GUL7	405 aa		28.42	■■■□□ 2.14
CAPN1-222	ENST00000532285	HDLBP	Q00341	1268 aa	Known RBP	28.42	■■■□□ 2.14
CAPN1-222	ENST00000532285	GRIK5	Q16478	980 aa		28.42	■■■□□ 2.14
CAPN1-222	ENST00000532285	PAPPA2	Q9BXP8	1791 aa		28.42	■■■□□ 2.14
CAPN1-222	ENST00000532285	COL1A1	P02452	1464 aa	Predicted RBP	28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	SEMA3E	O15041	775 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	ZBTB22	O15209	634 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	ADORA1	P30542	326 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	PHKA1	P46020	1223 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	FKBP1B	P68106	108 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	GRM1	Q13255	1194 aa		28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	MVP	Q14764	893 aa	Known RBP	28.41	■■■□□ 2.14
CAPN1-222	ENST00000532285	CRK	P46108	304 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	PRAMEF18	Q5VWM3	479 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	CCDC102B	Q68D86	513 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	XAGE2	Q96GT9	111 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	MRI	Q9BWK5	157 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	DENND2A	Q9ULE3	1009 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	MAST3	O60307	1309 aa		28.4	■■■□□ 2.14
CAPN1-222	ENST00000532285	NF2	P35240	595 aa		28.39	■■■□□ 2.14
CAPN1-222	ENST00000532285	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.39	■■■□□ 2.14
CAPN1-222	ENST00000532285	DEFB129	Q9H1M3	183 aa		28.39	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms