RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 JAG2Q9Y219 1238 aa27.34■■□□□ 1.97
LRRK1-208ENST00000532029 ZBTB12Q9Y330 459 aaPredicted RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 FAM205AQ6ZU69 1335 aa27.34■■□□□ 1.97
LRRK1-208ENST00000532029 PSME4Q14997 1843 aa27.33■■□□□ 1.97
LRRK1-208ENST00000532029 UQCRFS1P1P0C7P4 283 aa27.33■■□□□ 1.97
LRRK1-208ENST00000532029 TTC39AQ5SRH9 613 aa27.33■■□□□ 1.97
LRRK1-208ENST00000532029 TLR7Q9NYK1 1049 aaKnown RBP27.33■■□□□ 1.97
LRRK1-208ENST00000532029 DENND2AQ9ULE3 1009 aa27.33■■□□□ 1.97
LRRK1-208ENST00000532029 MYO3BQ8WXR4 1341 aa27.33■■□□□ 1.97
LRRK1-208ENST00000532029 WDR90Q96KV7 1748 aa27.33■■□□□ 1.96
LRRK1-208ENST00000532029 IQCA1LA6NCM1 817 aa27.32■■□□□ 1.96
LRRK1-208ENST00000532029 AGBL3Q8NEM8 1001 aa27.32■■□□□ 1.96
LRRK1-208ENST00000532029 RRAGCQ9HB90 399 aa27.32■■□□□ 1.96
LRRK1-208ENST00000532029 ANKRD45Q5TZF3 282 aa27.31■■□□□ 1.96
LRRK1-208ENST00000532029 DPF2Q92785 391 aa27.31■■□□□ 1.96
LRRK1-208ENST00000532029 MXD3Q9BW11 206 aa27.31■■□□□ 1.96
LRRK1-208ENST00000532029 NMRK2Q9NPI5 230 aa27.31■■□□□ 1.96
LRRK1-208ENST00000532029 VEGFAP15692 232 aaPredicted RBP27.3■■□□□ 1.96
LRRK1-208ENST00000532029 FKBP1AP62942 108 aaKnown RBP27.3■■□□□ 1.96
LRRK1-208ENST00000532029 SMC5Q8IY18 1101 aa27.3■■□□□ 1.96
LRRK1-208ENST00000532029 TBC1D22AQ8WUA7 517 aa27.3■■□□□ 1.96
LRRK1-208ENST00000532029 HACL1Q9UJ83 578 aa27.3■■□□□ 1.96
LRRK1-208ENST00000532029 ZBTB22O15209 634 aa27.29■■□□□ 1.96
LRRK1-208ENST00000532029 ARID4AP29374 1257 aaPredicted RBP27.29■■□□□ 1.96
LRRK1-208ENST00000532029 SCNN1DP51172 638 aa27.29■■□□□ 1.96
LRRK1-208ENST00000532029 MFSD14BQ5SR56 506 aa27.29■■□□□ 1.96
LRRK1-208ENST00000532029 GPRC5DQ9NZD1 345 aa27.29■■□□□ 1.96
LRRK1-208ENST00000532029 RASGRF1Q13972 1273 aa27.28■■□□□ 1.96
LRRK1-208ENST00000532029 WDR66Q8TBY9 1149 aa27.28■■□□□ 1.96
LRRK1-208ENST00000532029 CNOT7Q9UIV1 285 aaKnown RBP27.28■■□□□ 1.96
LRRK1-208ENST00000532029 GMLQ99445 158 aa27.27■■□□□ 1.96
LRRK1-208ENST00000532029 COL1A1P02452 1464 aaPredicted RBP27.26■■□□□ 1.95
LRRK1-208ENST00000532029 MYH13Q9UKX3 1938 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 PDS5AQ29RF7 1337 aaKnown RBP27.26■■□□□ 1.95
LRRK1-208ENST00000532029 POTECB2RU33 542 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 H7C1D1 291 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 EPS15P42566 896 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 B4GALNT3Q6L9W6 998 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 MICALL2Q8IY33 904 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 CERS5Q8N5B7 392 aa27.26■■□□□ 1.95
LRRK1-208ENST00000532029 ZNF512BQ96KM6 892 aaPredicted RBP27.26■■□□□ 1.95
LRRK1-208ENST00000532029 ZNF646O15015 1829 aaPredicted RBP27.25■■□□□ 1.95
LRRK1-208ENST00000532029 USP17L8P0C7I0 530 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 EPHX2P34913 555 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 KIAA0825Q8IV33 1275 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 OGFOD1Q8N543 542 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 SPATA5Q8NB90 893 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 HMG20BQ9P0W2 317 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 HDAC9Q9UKV0 1011 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 SCN4AP35499 1836 aa27.25■■□□□ 1.95
LRRK1-208ENST00000532029 MCAMP43121 646 aa27.24■■□□□ 1.95
LRRK1-208ENST00000532029 GPATCH3Q96I76 525 aa27.24■■□□□ 1.95
LRRK1-208ENST00000532029 TAF1DQ9H5J8 278 aaPredicted RBP27.24■■□□□ 1.95
LRRK1-208ENST00000532029 SCARF1Q14162 830 aa27.23■■□□□ 1.95
LRRK1-208ENST00000532029 ZGPATQ8N5A5 531 aaKnown RBP27.23■■□□□ 1.95
LRRK1-208ENST00000532029 ADARB2Q9NS39 739 aaKnown RBP27.23■■□□□ 1.95
LRRK1-208ENST00000532029 SALL1Q9NSC2 1324 aa27.22■■□□□ 1.95
LRRK1-208ENST00000532029 F8W031 263 aaPredicted RBP27.22■■□□□ 1.95
LRRK1-208ENST00000532029 MMP14P50281 582 aa27.22■■□□□ 1.95
LRRK1-208ENST00000532029 ERICH6BQ5W0A0 696 aa27.22■■□□□ 1.95
LRRK1-208ENST00000532029 C16orf71Q8IYS4 520 aaPredicted RBP27.22■■□□□ 1.95
LRRK1-208ENST00000532029 SNRKQ9NRH2 765 aa27.22■■□□□ 1.95
LRRK1-208ENST00000532029 SHTN1A0MZ66 631 aa27.21■■□□□ 1.95
LRRK1-208ENST00000532029 PI16Q6UXB8 463 aa27.21■■□□□ 1.95
LRRK1-208ENST00000532029 SUGT1Q9Y2Z0 365 aa27.21■■□□□ 1.95
LRRK1-208ENST00000532029 ZNF280AP59817 542 aaPredicted RBP27.2■■□□□ 1.94
LRRK1-208ENST00000532029 C1QTNF8P60827 252 aa27.2■■□□□ 1.94
LRRK1-208ENST00000532029 NUCB1Q02818 461 aa27.2■■□□□ 1.94
LRRK1-208ENST00000532029 EAPPQ56P03 285 aaPredicted RBP27.2■■□□□ 1.94
LRRK1-208ENST00000532029 PNMA8AQ86V59 439 aaPredicted RBP27.2■■□□□ 1.94
LRRK1-208ENST00000532029 LNPKQ9C0E8 428 aa27.2■■□□□ 1.94
LRRK1-208ENST00000532029 ECHDC1Q9NTX5 307 aa27.2■■□□□ 1.94
LRRK1-208ENST00000532029 ABCF2Q9UG63 623 aa27.2■■□□□ 1.94
LRRK1-208ENST00000532029 TTF2Q9UNY4 1162 aaKnown RBP27.2■■□□□ 1.94
LRRK1-208ENST00000532029 RBM26Q5T8P6 1007 aaKnown RBP27.19■■□□□ 1.94
LRRK1-208ENST00000532029 SPTY2D1Q68D10 685 aaPredicted RBP27.19■■□□□ 1.94
LRRK1-208ENST00000532029 USP50Q70EL3 339 aaPredicted RBP27.19■■□□□ 1.94
LRRK1-208ENST00000532029 CHD1LQ86WJ1 897 aa27.19■■□□□ 1.94
LRRK1-208ENST00000532029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.19■■□□□ 1.94
LRRK1-208ENST00000532029 CCDC136Q96JN2 1154 aa27.19■■□□□ 1.94
LRRK1-208ENST00000532029 MAST3O60307 1309 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 KIF3CO14782 793 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 LDHBP07195 334 aaKnown RBP27.18■■□□□ 1.94
LRRK1-208ENST00000532029 ATP5JP18859 108 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 ZAP70P43403 619 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 TBC1D10BQ4KMP7 808 aaPredicted RBP27.18■■□□□ 1.94
LRRK1-208ENST00000532029 SAMD7Q7Z3H4 446 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 MYOZ2Q9NPC6 264 aa27.18■■□□□ 1.94
LRRK1-208ENST00000532029 GRIK5Q16478 980 aa27.17■■□□□ 1.94
LRRK1-208ENST00000532029 KIF4BQ2VIQ3 1234 aa27.17■■□□□ 1.94
LRRK1-208ENST00000532029 MX1P20591 662 aa27.16■■□□□ 1.94
LRRK1-208ENST00000532029 PRDX5P30044 214 aa27.16■■□□□ 1.94
LRRK1-208ENST00000532029 TRPM4Q8TD43 1214 aa27.16■■□□□ 1.94
LRRK1-208ENST00000532029 OTUD7AQ8TE49 926 aaPredicted RBP27.16■■□□□ 1.94
LRRK1-208ENST00000532029 BOLA2Q9H3K6 86 aa27.16■■□□□ 1.94
LRRK1-208ENST00000532029 TTC41PQ6P2S7 1318 aa27.16■■□□□ 1.94
LRRK1-208ENST00000532029 TBC1D9Q6ZT07 1266 aa27.15■■□□□ 1.94
LRRK1-208ENST00000532029 ERICH6Q7L0X2 663 aa27.15■■□□□ 1.94
LRRK1-208ENST00000532029 DNAJC2Q99543 621 aaKnown RBP27.15■■□□□ 1.94
LRRK1-208ENST00000532029 CLEC11AQ9Y240 323 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms