RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 LPIN2Q92539 896 aa13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
GPATCH4-216ENST00000531900 PNMA6EA0A0J9YXQ4 647 aa13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 SHTN1A0MZ66 631 aa13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 TBC1D10BQ4KMP7 808 aaPredicted RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 GLIS2Q9BZE0 524 aaPredicted RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 CEP126Q9P2H0 1117 aa13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
GPATCH4-216ENST00000531900 FOXN1O15353 648 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 GYG1P46976 350 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 GTF2IP78347 998 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 CAPNS2Q96L46 248 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 ZBTB40Q9NUA8 1239 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
GPATCH4-216ENST00000531900 TRPM7Q96QT4 1865 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 EGFRP00533 1210 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 GRM1Q13255 1194 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 USP48Q86UV5 1035 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 MTMR14Q8NCE2 650 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 ZBED3Q96IU2 234 aaPredicted RBP13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 SIL1Q9H173 461 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 ZNF408Q9H9D4 720 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
GPATCH4-216ENST00000531900 SLC5A1P13866 664 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 KIF4BQ2VIQ3 1234 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 KRT26Q7Z3Y9 468 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 MYOZ2Q9NPC6 264 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 AKAP2Q9Y2D5 859 aa13.41□□□□□ -0.26
GPATCH4-216ENST00000531900 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 MAP2K2P36507 400 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 BCAMP50895 628 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 MRIQ9BWK5 157 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 GPR108Q9NPR9 543 aa13.4□□□□□ -0.26
GPATCH4-216ENST00000531900 MYH13Q9UKX3 1938 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 SEMA3EO15041 775 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 TBC1D22AQ8WUA7 517 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 PDS5AQ29RF7 1337 aaKnown RBP13.39□□□□□ -0.27
GPATCH4-216ENST00000531900 WNT10BO00744 389 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 LBX1P52954 281 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 HDLBPQ00341 1268 aaKnown RBP13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 TFCP2Q12800 502 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 SCARF1Q14162 830 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 C2orf69Q8N8R5 385 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 C1orf115Q9H7X2 142 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 ECM29Q5VYK3 1845 aa13.38□□□□□ -0.27
GPATCH4-216ENST00000531900 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 HUNKP57058 714 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 TIMM10P62072 90 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 GGA3Q9NZ52 723 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 SERPINA10Q9UK55 444 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 SALL1Q9NSC2 1324 aa13.37□□□□□ -0.27
GPATCH4-216ENST00000531900 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 CAPN15O75808 1086 aa13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 XAGE2Q96GT9 111 aa13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 GBA2Q9HCG7 927 aaPredicted RBP13.36□□□□□ -0.27
GPATCH4-216ENST00000531900 ADM5C9JUS6 153 aa13.35□□□□□ -0.27
GPATCH4-216ENST00000531900 CA12O43570 354 aa13.35□□□□□ -0.27
GPATCH4-216ENST00000531900 AOC2O75106 756 aa13.35□□□□□ -0.27
GPATCH4-216ENST00000531900 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
GPATCH4-216ENST00000531900 NOGQ13253 232 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms