RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 UBE2Q2LH0YL09 131 aa21.23■□□□□ 0.99
CPSF1-207ENST00000531727 SLFN5Q08AF3 891 aa21.23■□□□□ 0.99
CPSF1-207ENST00000531727 REM2Q8IYK8 340 aaPredicted RBP21.23■□□□□ 0.99
CPSF1-207ENST00000531727 CSRNP1Q96S65 589 aa21.23■□□□□ 0.99
CPSF1-207ENST00000531727 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
CPSF1-207ENST00000531727 DLGAP5Q15398 846 aa21.22■□□□□ 0.99
CPSF1-207ENST00000531727 MTMR14Q8NCE2 650 aa21.22■□□□□ 0.99
CPSF1-207ENST00000531727 SSH1Q8WYL5 1049 aa21.22■□□□□ 0.99
CPSF1-207ENST00000531727 RNF186Q9NXI6 227 aa21.22■□□□□ 0.99
CPSF1-207ENST00000531727 UBE4AQ14139 1066 aa21.21■□□□□ 0.99
CPSF1-207ENST00000531727 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
CPSF1-207ENST00000531727 RABL6Q3YEC7 729 aaPredicted RBP21.21■□□□□ 0.99
CPSF1-207ENST00000531727 PUS3Q9BZE2 481 aaKnown RBP21.21■□□□□ 0.99
CPSF1-207ENST00000531727 BICC1Q9H694 974 aaKnown RBP21.21■□□□□ 0.99
CPSF1-207ENST00000531727 TRPA1O75762 1119 aa21.2■□□□□ 0.98
CPSF1-207ENST00000531727 MCOLN1Q9GZU1 580 aa21.2■□□□□ 0.98
CPSF1-207ENST00000531727 RIPOR2Q9Y4F9 1068 aa21.2■□□□□ 0.98
CPSF1-207ENST00000531727 FAM205AQ6ZU69 1335 aa21.2■□□□□ 0.98
CPSF1-207ENST00000531727 F8W031 263 aaPredicted RBP21.19■□□□□ 0.98
CPSF1-207ENST00000531727 ANKRD44Q8N8A2 993 aa21.19■□□□□ 0.98
CPSF1-207ENST00000531727 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
CPSF1-207ENST00000531727 MROH5Q6ZUA9 1318 aa21.19■□□□□ 0.98
CPSF1-207ENST00000531727 ARAP2Q8WZ64 1704 aa21.18■□□□□ 0.98
CPSF1-207ENST00000531727 HIBADHP31937 336 aaKnown RBP21.18■□□□□ 0.98
CPSF1-207ENST00000531727 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
CPSF1-207ENST00000531727 CFAP100Q494V2 611 aa21.18■□□□□ 0.98
CPSF1-207ENST00000531727 ARMC9Q7Z3E5 817 aa21.18■□□□□ 0.98
CPSF1-207ENST00000531727 TDRD7Q8NHU6 1098 aaKnown RBP21.18■□□□□ 0.98
CPSF1-207ENST00000531727 PCDHAC2Q9Y5I4 1007 aa21.18■□□□□ 0.98
CPSF1-207ENST00000531727 SPDYE2BA6NHP3 402 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 SPDYE6P0CI01 402 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 GYG1P46976 350 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 DGKZQ13574 1117 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 CDCA7LQ96GN5 454 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 FAM84BQ96KN1 310 aaPredicted RBP21.17■□□□□ 0.98
CPSF1-207ENST00000531727 DEFB129Q9H1M3 183 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 PPP2R3BQ9Y5P8 575 aa21.17■□□□□ 0.98
CPSF1-207ENST00000531727 CCDC85CA6NKD9 419 aa21.16■□□□□ 0.98
CPSF1-207ENST00000531727 MYO1BO43795 1136 aa21.16■□□□□ 0.98
CPSF1-207ENST00000531727 PRKG1Q13976 671 aa21.16■□□□□ 0.98
CPSF1-207ENST00000531727 USP44Q9H0E7 712 aa21.16■□□□□ 0.98
CPSF1-207ENST00000531727 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
CPSF1-207ENST00000531727 LRRC24Q50LG9 513 aa21.15■□□□□ 0.98
CPSF1-207ENST00000531727 MFSD14BQ5SR56 506 aa21.15■□□□□ 0.98
CPSF1-207ENST00000531727 TRMT2AQ8IZ69 625 aaKnown RBP21.15■□□□□ 0.98
CPSF1-207ENST00000531727 PRMT6Q96LA8 375 aaPredicted RBP21.15■□□□□ 0.98
CPSF1-207ENST00000531727 CLRN2A0PK11 232 aa21.14■□□□□ 0.97
CPSF1-207ENST00000531727 METTL24Q5JXM2 366 aa21.14■□□□□ 0.97
CPSF1-207ENST00000531727 LDLRAD1Q5T700 205 aa21.14■□□□□ 0.97
CPSF1-207ENST00000531727 SMC4Q9NTJ3 1288 aa21.14■□□□□ 0.97
CPSF1-207ENST00000531727 ANGEL1Q9UNK9 670 aaKnown RBP21.14■□□□□ 0.97
CPSF1-207ENST00000531727 SSC5DA1L4H1 1573 aa21.14■□□□□ 0.97
CPSF1-207ENST00000531727 AOX1Q06278 1338 aa21.13■□□□□ 0.97
CPSF1-207ENST00000531727 RBM5P52756 815 aaKnown RBP eCLIP21.13■□□□□ 0.97
CPSF1-207ENST00000531727 VEZTQ9HBM0 779 aa21.13■□□□□ 0.97
CPSF1-207ENST00000531727 PDE8BO95263 885 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 TM4SF4P48230 202 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 MAP3K11Q16584 847 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 FBXO33Q7Z6M2 555 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 VGLL2Q8N8G2 317 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 KLHDC4Q8TBB5 520 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 SERPINA10Q9UK55 444 aa21.12■□□□□ 0.97
CPSF1-207ENST00000531727 TTF2Q9UNY4 1162 aaKnown RBP21.12■□□□□ 0.97
CPSF1-207ENST00000531727 MKRN3Q13064 507 aaKnown RBP21.11■□□□□ 0.97
CPSF1-207ENST00000531727 VPS37DQ86XT2 251 aa21.11■□□□□ 0.97
CPSF1-207ENST00000531727 FZD1Q9UP38 647 aa21.11■□□□□ 0.97
CPSF1-207ENST00000531727 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
CPSF1-207ENST00000531727 PPP1R12BO60237 982 aaPredicted RBP21.1■□□□□ 0.97
CPSF1-207ENST00000531727 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
CPSF1-207ENST00000531727 SREBF2Q12772 1141 aa21.1■□□□□ 0.97
CPSF1-207ENST00000531727 SUPT20HL1Q3ZLR7 823 aa21.1■□□□□ 0.97
CPSF1-207ENST00000531727 CAVIN4Q5BKX8 364 aa21.1■□□□□ 0.97
CPSF1-207ENST00000531727 SPDYE2Q495Y8 402 aa21.09■□□□□ 0.97
CPSF1-207ENST00000531727 SPRYD7Q5W111 196 aa21.09■□□□□ 0.97
CPSF1-207ENST00000531727 IQSEC3Q9UPP2 1182 aaPredicted RBP21.09■□□□□ 0.97
CPSF1-207ENST00000531727 LAMB1P07942 1786 aa21.08■□□□□ 0.97
CPSF1-207ENST00000531727 RFX5P48382 616 aaPredicted RBP21.08■□□□□ 0.97
CPSF1-207ENST00000531727 TNFAIP1Q13829 316 aa21.08■□□□□ 0.97
CPSF1-207ENST00000531727 RASA3Q14644 834 aa21.08■□□□□ 0.97
CPSF1-207ENST00000531727 NBPF12Q5TAG4 269 aaPredicted RBP21.08■□□□□ 0.97
CPSF1-207ENST00000531727 TBC1D22AQ8WUA7 517 aa21.08■□□□□ 0.97
CPSF1-207ENST00000531727 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.97
CPSF1-207ENST00000531727 KIF16BQ96L93 1317 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 UNCXA6NJT0 531 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 FRAT2O75474 233 aaPredicted RBP21.07■□□□□ 0.96
CPSF1-207ENST00000531727 TBC1D8O95759 1140 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 CRKP46108 304 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 RGS19P49795 217 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 CHAF1AQ13111 956 aaPredicted RBP21.07■□□□□ 0.96
CPSF1-207ENST00000531727 PUM3Q15397 648 aaKnown RBP21.07■□□□□ 0.96
CPSF1-207ENST00000531727 DZIP1LQ8IYY4 767 aaKnown RBP21.07■□□□□ 0.96
CPSF1-207ENST00000531727 SLC10A4Q96EP9 437 aa21.07■□□□□ 0.96
CPSF1-207ENST00000531727 TDRD3Q9H7E2 651 aaKnown RBP21.07■□□□□ 0.96
CPSF1-207ENST00000531727 EYA2O00167 538 aa21.06■□□□□ 0.96
CPSF1-207ENST00000531727 FGFR2P21802 821 aa21.06■□□□□ 0.96
CPSF1-207ENST00000531727 GRIK5Q16478 980 aa21.06■□□□□ 0.96
CPSF1-207ENST00000531727 CTU1Q7Z7A3 348 aaKnown RBP21.06■□□□□ 0.96
CPSF1-207ENST00000531727 NOB1Q9ULX3 412 aaKnown RBP21.06■□□□□ 0.96
CPSF1-207ENST00000531727 IFIT1P09914 478 aaKnown RBP21.05■□□□□ 0.96
CPSF1-207ENST00000531727 UBTFL1P0CB47 393 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms