RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
SF3B2-212ENST00000531589 KIF23Q02241 960 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-212ENST00000531589 TTLL12Q14166 644 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-212ENST00000531589 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
SF3B2-212ENST00000531589 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
SF3B2-212ENST00000531589 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
SF3B2-212ENST00000531589 ZBED3Q96IU2 234 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-212ENST00000531589 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 SAGE1Q9NXZ1 904 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
SF3B2-212ENST00000531589 FAM205AQ6ZU69 1335 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 PAPPA2Q9BXP8 1791 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-212ENST00000531589 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
SF3B2-212ENST00000531589 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
SF3B2-212ENST00000531589 GYG1P46976 350 aa16.46■□□□□ 0.23
SF3B2-212ENST00000531589 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.23
SF3B2-212ENST00000531589 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
SF3B2-212ENST00000531589 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
SF3B2-212ENST00000531589 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-212ENST00000531589 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
SF3B2-212ENST00000531589 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
SF3B2-212ENST00000531589 ZNF646O15015 1829 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-212ENST00000531589 COL1A1P02452 1464 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-212ENST00000531589 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 UBE2Q2LH0YL09 131 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 PDE8BO95263 885 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 DEFB129Q9H1M3 183 aa16.45■□□□□ 0.22
SF3B2-212ENST00000531589 A0A1B0GUL6 1792 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-212ENST00000531589 UBTFL1P0CB47 393 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-212ENST00000531589 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 ABHD8Q96I13 439 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 RNF186Q9NXI6 227 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 SERPINA10Q9UK55 444 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
SF3B2-212ENST00000531589 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
SF3B2-212ENST00000531589 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-212ENST00000531589 TRPA1O75762 1119 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
SF3B2-212ENST00000531589 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 MOB2Q70IA6 237 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 TBC1D22AQ8WUA7 517 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 PRMT6Q96LA8 375 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-212ENST00000531589 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
SF3B2-212ENST00000531589 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
SF3B2-212ENST00000531589 EYA2O00167 538 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 TNFAIP1Q13829 316 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
SF3B2-212ENST00000531589 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 ARHGAP45Q92619 1136 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 VEZTQ9HBM0 779 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
SF3B2-212ENST00000531589 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
SF3B2-212ENST00000531589 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
SF3B2-212ENST00000531589 PRKG1Q13976 671 aa16.41■□□□□ 0.22
SF3B2-212ENST00000531589 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
SF3B2-212ENST00000531589 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
SF3B2-212ENST00000531589 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
SF3B2-212ENST00000531589 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
SF3B2-212ENST00000531589 SREBF2Q12772 1141 aa16.4■□□□□ 0.22
SF3B2-212ENST00000531589 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
SF3B2-212ENST00000531589 LPIN2Q92539 896 aa16.4■□□□□ 0.22
SF3B2-212ENST00000531589 IPO8O15397 1037 aaKnown RBP16.39■□□□□ 0.21
SF3B2-212ENST00000531589 SLC5A1P13866 664 aa16.39■□□□□ 0.21
SF3B2-212ENST00000531589 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-212ENST00000531589 TNNI2P48788 182 aa16.39■□□□□ 0.21
SF3B2-212ENST00000531589 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
SF3B2-212ENST00000531589 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-212ENST00000531589 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
SF3B2-212ENST00000531589 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-212ENST00000531589 SUGT1Q9Y2Z0 365 aa16.39■□□□□ 0.21
SF3B2-212ENST00000531589 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
SF3B2-212ENST00000531589 CIAO1O76071 339 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 FGFR2P21802 821 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 CRKP46108 304 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 TM4SF4P48230 202 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 BCAMP50895 628 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 DGKZQ13574 1117 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 RASA3Q14644 834 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
SF3B2-212ENST00000531589 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 MCOLN1Q9GZU1 580 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 MAST3O60307 1309 aa16.38■□□□□ 0.21
SF3B2-212ENST00000531589 GNAI3P08754 354 aa16.37■□□□□ 0.21
SF3B2-212ENST00000531589 IREB2P48200 963 aaKnown RBP16.37■□□□□ 0.21
SF3B2-212ENST00000531589 INHBEP58166 350 aa16.37■□□□□ 0.21
SF3B2-212ENST00000531589 TEKT1Q969V4 418 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms