RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 ARFGEF1Q9Y6D6 1849 aa9.34□□□□□ -0.92
TRIM53CP-201ENST00000531490 COL5A3P25940 1745 aaPredicted RBP9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 TNRC6CQ9HCJ0 1690 aaKnown RBP9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 TBC1D9BQ66K14 1250 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 ZBTB33Q86T24 672 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 SLC52A2Q9HAB3 445 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 PRDM10Q9NQV6 1147 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
TRIM53CP-201ENST00000531490 NR3C2P08235 984 aa9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 CTCFP49711 727 aaPredicted RBP9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 NR5A1Q13285 461 aa9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 VASH1Q7L8A9 365 aaPredicted RBP9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 ATP13A2Q9NQ11 1180 aa9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
TRIM53CP-201ENST00000531490 ADAMTS7Q9UKP4 1686 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 CAPN5O15484 640 aaPredicted RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 RNMTO43148 476 aaKnown RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 ADAM32Q8TC27 787 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 CFAP53Q96M91 514 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 TAOK3Q9H2K8 898 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 TJP1Q07157 1748 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 SBF1O95248 1867 aa9.31□□□□□ -0.92
TRIM53CP-201ENST00000531490 ZNF831Q5JPB2 1677 aa9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 EIF5P55010 431 aaKnown RBP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 EAPPQ56P03 285 aaPredicted RBP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 OLFM4Q6UX06 510 aa9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 ABHD8Q96I13 439 aa9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
TRIM53CP-201ENST00000531490 HSPA8P11142 646 aaKnown RBP9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 TIMP2P16035 220 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 FSHRP23945 695 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 PRKAR2BP31323 418 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 PRPF40BQ6NWY9 871 aaKnown RBP9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 LDHDQ86WU2 507 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 IL17REQ8NFR9 667 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 SCN11AQ9UI33 1791 aa9.29□□□□□ -0.92
TRIM53CP-201ENST00000531490 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 PDE6BP35913 854 aa9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 RALBP1Q15311 655 aa9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 MAP1SQ66K74 1059 aaPredicted RBP9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 SLC10A4Q96EP9 437 aa9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
TRIM53CP-201ENST00000531490 GPR37L1O60883 481 aa9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 A1BGP04217 495 aa9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 SRGNP10124 158 aa9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 PIP4K2AP48426 406 aaPredicted RBP9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 LTBP3Q9NS15 1303 aa9.27□□□□□ -0.93
TRIM53CP-201ENST00000531490 IQCA1LA6NCM1 817 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 CCDC85CA6NKD9 419 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 STARD3NLO95772 234 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 BMP1P13497 986 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 TRIM46Q7Z4K8 759 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 C7orf43Q8WVR3 580 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 CNKSR1Q969H4 720 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 ITPKCQ96DU7 683 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 CDV3Q9UKY7 258 aaKnown RBP9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 TIAM2Q8IVF5 1701 aa9.26□□□□□ -0.93
TRIM53CP-201ENST00000531490 A0A087WZG4 1122 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 ZBBXA8MT70 800 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 GNAT3A8MTJ3 354 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 NPHP1O15259 732 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 KCNQ3O43525 872 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 EPHX2P34913 555 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 GRM1Q13255 1194 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 STYK1Q6J9G0 422 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms