RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 ZNF609O15014 1411 aa11.81□□□□□ -0.52
NEDD8-206ENST00000531430 ANKRD18BA2A2Z9 1011 aa11.81□□□□□ -0.52
NEDD8-206ENST00000531430 IGF2BP3O00425 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEDD8-206ENST00000531430 EN2P19622 333 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-206ENST00000531430 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
NEDD8-206ENST00000531430 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
NEDD8-206ENST00000531430 PRMT6Q96LA8 375 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-206ENST00000531430 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
NEDD8-206ENST00000531430 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-206ENST00000531430 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-206ENST00000531430 SP3Q02447 781 aa11.8□□□□□ -0.52
NEDD8-206ENST00000531430 CRHR2Q13324 411 aa11.8□□□□□ -0.52
NEDD8-206ENST00000531430 GCKRQ14397 625 aa11.8□□□□□ -0.52
NEDD8-206ENST00000531430 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
NEDD8-206ENST00000531430 ELP3Q9H9T3 547 aa11.8□□□□□ -0.52
NEDD8-206ENST00000531430 ZBTB48P10074 688 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-206ENST00000531430 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-206ENST00000531430 RASA3Q14644 834 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 SLC4A8Q2Y0W8 1093 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-206ENST00000531430 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 CERS5Q8N5B7 392 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 ZBED3Q96IU2 234 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-206ENST00000531430 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 PSME4Q14997 1843 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
NEDD8-206ENST00000531430 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
NEDD8-206ENST00000531430 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
NEDD8-206ENST00000531430 CSF1RP07333 972 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 GJA5P36382 358 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 OPTNQ96CV9 577 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.53
NEDD8-206ENST00000531430 PTPN18Q99952 460 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
NEDD8-206ENST00000531430 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
NEDD8-206ENST00000531430 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
NEDD8-206ENST00000531430 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
NEDD8-206ENST00000531430 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 FLIIQ13045 1269 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 TAF1CQ15572 869 aaPredicted RBP11.76□□□□□ -0.53
NEDD8-206ENST00000531430 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 ZFYVE28Q9HCC9 887 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
NEDD8-206ENST00000531430 AOX1Q06278 1338 aa11.76□□□□□ -0.53
NEDD8-206ENST00000531430 CCL15-CCL14A0A0B4J2E2 113 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 WDHD1O75717 1129 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-206ENST00000531430 CCL15Q16663 113 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 CCDC57Q2TAC2 916 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 SLC9C1Q4G0N8 1177 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
NEDD8-206ENST00000531430 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-206ENST00000531430 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-206ENST00000531430 IL1R1P14778 569 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 CASP7P55210 303 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 TNFAIP1Q13829 316 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 CSADQ9Y600 493 aa11.74□□□□□ -0.53
NEDD8-206ENST00000531430 UNCXA6NJT0 531 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 F6X3S4 739 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 FRAT2O75474 233 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-206ENST00000531430 MYH3P11055 1940 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 HIBADHP31937 336 aaKnown RBP11.73□□□□□ -0.53
NEDD8-206ENST00000531430 GYG1P46976 350 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 TNNI2P48788 182 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 FOXO4P98177 505 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 CAP1Q01518 475 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 KIF22Q14807 665 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 MFSD14BQ5SR56 506 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-206ENST00000531430 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-206ENST00000531430 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-206ENST00000531430 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
NEDD8-206ENST00000531430 COL1A1P02452 1464 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 GTF2A2P52657 109 aa11.72□□□□□ -0.53
NEDD8-206ENST00000531430 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
NEDD8-206ENST00000531430 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
NEDD8-206ENST00000531430 SH3TC2Q8TF17 1288 aa11.72□□□□□ -0.53
NEDD8-206ENST00000531430 BRI3BPQ8WY22 251 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms