RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
SMPD1-206ENST00000531336 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
SMPD1-206ENST00000531336 RRAGCQ9HB90 399 aa17■□□□□ 0.31
SMPD1-206ENST00000531336 GNL3LQ9NVN8 582 aaKnown RBP17■□□□□ 0.31
SMPD1-206ENST00000531336 DBNLQ9UJU6 430 aaKnown RBP17■□□□□ 0.31
SMPD1-206ENST00000531336 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-206ENST00000531336 IGHDP01880 384 aa16.98■□□□□ 0.31
SMPD1-206ENST00000531336 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
SMPD1-206ENST00000531336 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 SHTN1A0MZ66 631 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 IQCA1LA6NCM1 817 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 POTECB2RU33 542 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
SMPD1-206ENST00000531336 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
SMPD1-206ENST00000531336 MICALL2Q8IY33 904 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 GCC1Q96CN9 775 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 GPRC5DQ9NZD1 345 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
SMPD1-206ENST00000531336 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-206ENST00000531336 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-206ENST00000531336 EPS15P42566 896 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 MFSD14BQ5SR56 506 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 AGBL3Q8NEM8 1001 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 DENND2AQ9ULE3 1009 aa16.96■□□□□ 0.31
SMPD1-206ENST00000531336 SEMA3EO15041 775 aa16.95■□□□□ 0.3
SMPD1-206ENST00000531336 UQCRFS1P1P0C7P4 283 aa16.95■□□□□ 0.3
SMPD1-206ENST00000531336 KIAA0825Q8IV33 1275 aa16.95■□□□□ 0.3
SMPD1-206ENST00000531336 DPF2Q92785 391 aa16.95■□□□□ 0.3
SMPD1-206ENST00000531336 GMLQ99445 158 aa16.95■□□□□ 0.3
SMPD1-206ENST00000531336 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-206ENST00000531336 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-206ENST00000531336 CNOT7Q9UIV1 285 aaKnown RBP16.95■□□□□ 0.3
SMPD1-206ENST00000531336 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-206ENST00000531336 EPHX2P34913 555 aa16.94■□□□□ 0.3
SMPD1-206ENST00000531336 FKBP1AP62942 108 aaKnown RBP16.94■□□□□ 0.3
SMPD1-206ENST00000531336 SCARF1Q14162 830 aa16.94■□□□□ 0.3
SMPD1-206ENST00000531336 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
SMPD1-206ENST00000531336 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
SMPD1-206ENST00000531336 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
SMPD1-206ENST00000531336 MYO5AQ9Y4I1 1855 aaKnown RBP16.93■□□□□ 0.3
SMPD1-206ENST00000531336 MAST2Q6P0Q8 1798 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 H7C1D1 291 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 KIF3CO14782 793 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 MCAMP43121 646 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-206ENST00000531336 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-206ENST00000531336 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
SMPD1-206ENST00000531336 HMG20BQ9P0W2 317 aa16.93■□□□□ 0.3
SMPD1-206ENST00000531336 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
SMPD1-206ENST00000531336 GRIK5Q16478 980 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 RBM26Q5T8P6 1007 aaKnown RBP16.92■□□□□ 0.3
SMPD1-206ENST00000531336 SAMD7Q7Z3H4 446 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 SPATA5Q8NB90 893 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 TRPM4Q8TD43 1214 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
SMPD1-206ENST00000531336 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
SMPD1-206ENST00000531336 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-206ENST00000531336 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-206ENST00000531336 OGFOD1Q8N543 542 aa16.91■□□□□ 0.3
SMPD1-206ENST00000531336 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
SMPD1-206ENST00000531336 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
SMPD1-206ENST00000531336 ZBTB22O15209 634 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 EGFRP00533 1210 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 ZNF512BQ96KM6 892 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-206ENST00000531336 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 ABCF2Q9UG63 623 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 SALL1Q9NSC2 1324 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 MYH2Q9UKX2 1941 aa16.9■□□□□ 0.3
SMPD1-206ENST00000531336 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
SMPD1-206ENST00000531336 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 PRDX5P30044 214 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 ZAP70P43403 619 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 USP50Q70EL3 339 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-206ENST00000531336 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-206ENST00000531336 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
SMPD1-206ENST00000531336 OTUD7AQ8TE49 926 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-206ENST00000531336 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
SMPD1-206ENST00000531336 NUCB1Q02818 461 aa16.88■□□□□ 0.29
SMPD1-206ENST00000531336 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
SMPD1-206ENST00000531336 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
SMPD1-206ENST00000531336 ECHDC1Q9NTX5 307 aa16.88■□□□□ 0.29
SMPD1-206ENST00000531336 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
SMPD1-206ENST00000531336 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
SMPD1-206ENST00000531336 MAST3O60307 1309 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms