RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RASAL3Q86YV0 1011 aa28.03■■■□□ 2.08
TRAPPC4-210ENST00000531290 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
TRAPPC4-210ENST00000531290 CSRNP1Q96S65 589 aa28.03■■■□□ 2.08
TRAPPC4-210ENST00000531290 SAGE1Q9NXZ1 904 aa28.03■■■□□ 2.08
TRAPPC4-210ENST00000531290 JAG2Q9Y219 1238 aa28.03■■■□□ 2.08
TRAPPC4-210ENST00000531290 MROH5Q6ZUA9 1318 aa28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 HIBADHP31937 336 aaKnown RBP28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 ALDH1L2Q3SY69 923 aa28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 RABL6Q3YEC7 729 aaPredicted RBP28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 MTMR14Q8NCE2 650 aa28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 RIPOR2Q9Y4F9 1068 aa28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 PSME4Q14997 1843 aa28.02■■■□□ 2.08
TRAPPC4-210ENST00000531290 MYO1BO43795 1136 aa28.01■■■□□ 2.07
TRAPPC4-210ENST00000531290 TRPA1O75762 1119 aa28.01■■■□□ 2.07
TRAPPC4-210ENST00000531290 RNF186Q9NXI6 227 aa28.01■■■□□ 2.07
TRAPPC4-210ENST00000531290 CFAP100Q494V2 611 aa28■■■□□ 2.07
TRAPPC4-210ENST00000531290 ARMC9Q7Z3E5 817 aa28■■■□□ 2.07
TRAPPC4-210ENST00000531290 SMC4Q9NTJ3 1288 aa28■■■□□ 2.07
TRAPPC4-210ENST00000531290 POLR2AP24928 1970 aaKnown RBP27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 GYG1P46976 350 aa27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 ANKRD44Q8N8A2 993 aa27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 TDRD7Q8NHU6 1098 aaKnown RBP27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 FAM84BQ96KN1 310 aaPredicted RBP27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 USP44Q9H0E7 712 aa27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 DEFB129Q9H1M3 183 aa27.99■■■□□ 2.07
TRAPPC4-210ENST00000531290 RBM5P52756 815 aaKnown RBP eCLIP27.98■■■□□ 2.07
TRAPPC4-210ENST00000531290 PRKG1Q13976 671 aa27.98■■■□□ 2.07
TRAPPC4-210ENST00000531290 METTL24Q5JXM2 366 aa27.98■■■□□ 2.07
TRAPPC4-210ENST00000531290 VPS37DQ86XT2 251 aa27.98■■■□□ 2.07
TRAPPC4-210ENST00000531290 FAM205AQ6ZU69 1335 aa27.97■■■□□ 2.07
TRAPPC4-210ENST00000531290 CCER2I3L3R5 266 aa27.97■■■□□ 2.07
TRAPPC4-210ENST00000531290 SPDYE2BA6NHP3 402 aa27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 SPDYE6P0CI01 402 aa27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 LRRC24Q50LG9 513 aa27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 MFSD14BQ5SR56 506 aa27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 TRMT2AQ8IZ69 625 aaKnown RBP27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 PRMT6Q96LA8 375 aaPredicted RBP27.96■■■□□ 2.07
TRAPPC4-210ENST00000531290 CLRN2A0PK11 232 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 CCDC85CA6NKD9 419 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 CT47B1P0C2W7 299 aaPredicted RBP27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 DGKZQ13574 1117 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 MCOLN1Q9GZU1 580 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 PCDHAC2Q9Y5I4 1007 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 PAPPA2Q9BXP8 1791 aa27.95■■■□□ 2.06
TRAPPC4-210ENST00000531290 CAVIN4Q5BKX8 364 aa27.94■■■□□ 2.06
TRAPPC4-210ENST00000531290 VEZTQ9HBM0 779 aa27.94■■■□□ 2.06
TRAPPC4-210ENST00000531290 PPP2R3BQ9Y5P8 575 aa27.94■■■□□ 2.06
TRAPPC4-210ENST00000531290 FRAT2O75474 233 aaPredicted RBP27.93■■■□□ 2.06
TRAPPC4-210ENST00000531290 PDE8BO95263 885 aa27.93■■■□□ 2.06
TRAPPC4-210ENST00000531290 PTPN12Q05209 780 aaKnown RBP27.93■■■□□ 2.06
TRAPPC4-210ENST00000531290 ANGEL1Q9UNK9 670 aaKnown RBP27.93■■■□□ 2.06
TRAPPC4-210ENST00000531290 TTF2Q9UNY4 1162 aaKnown RBP27.93■■■□□ 2.06
TRAPPC4-210ENST00000531290 SUPT20HL1Q3ZLR7 823 aa27.92■■■□□ 2.06
TRAPPC4-210ENST00000531290 FBXO33Q7Z6M2 555 aa27.92■■■□□ 2.06
TRAPPC4-210ENST00000531290 KLHDC4Q8TBB5 520 aa27.92■■■□□ 2.06
TRAPPC4-210ENST00000531290 PPP1R12BO60237 982 aaPredicted RBP27.91■■■□□ 2.06
TRAPPC4-210ENST00000531290 LDLRAD1Q5T700 205 aa27.91■■■□□ 2.06
TRAPPC4-210ENST00000531290 SERPINA10Q9UK55 444 aa27.91■■■□□ 2.06
TRAPPC4-210ENST00000531290 NOB1Q9ULX3 412 aaKnown RBP27.91■■■□□ 2.06
TRAPPC4-210ENST00000531290 COL1A1P02452 1464 aaPredicted RBP27.9■■■□□ 2.06
TRAPPC4-210ENST00000531290 MKRN3Q13064 507 aaKnown RBP27.9■■■□□ 2.06
TRAPPC4-210ENST00000531290 CHAF1AQ13111 956 aaPredicted RBP27.89■■■□□ 2.06
TRAPPC4-210ENST00000531290 IQSEC3Q9UPP2 1182 aaPredicted RBP27.89■■■□□ 2.06
TRAPPC4-210ENST00000531290 UBTFL1P0CB47 393 aaPredicted RBP27.88■■■□□ 2.05
TRAPPC4-210ENST00000531290 TM4SF4P48230 202 aa27.88■■■□□ 2.05
TRAPPC4-210ENST00000531290 VGLL2Q8N8G2 317 aa27.88■■■□□ 2.05
TRAPPC4-210ENST00000531290 SLC10A4Q96EP9 437 aa27.88■■■□□ 2.05
TRAPPC4-210ENST00000531290 API5Q9BZZ5 524 aaKnown RBP27.88■■■□□ 2.05
TRAPPC4-210ENST00000531290 IFIT1P09914 478 aaKnown RBP27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 SREBF2Q12772 1141 aa27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 TNFAIP1Q13829 316 aa27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 RASA3Q14644 834 aa27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 PUM3Q15397 648 aaKnown RBP27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 TBC1D22AQ8WUA7 517 aa27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 FZD1Q9UP38 647 aa27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 ZNF646O15015 1829 aaPredicted RBP27.87■■■□□ 2.05
TRAPPC4-210ENST00000531290 EYA2O00167 538 aa27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 BCAMP50895 628 aa27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 DZIP1LQ8IYY4 767 aaKnown RBP27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 ZNF70Q9UC06 446 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 HDAC5Q9UQL6 1122 aa27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 AOX1Q06278 1338 aa27.86■■■□□ 2.05
TRAPPC4-210ENST00000531290 CRKP46108 304 aa27.85■■■□□ 2.05
TRAPPC4-210ENST00000531290 MAP3K11Q16584 847 aa27.85■■■□□ 2.05
TRAPPC4-210ENST00000531290 NBPF12Q5TAG4 269 aaPredicted RBP27.85■■■□□ 2.05
TRAPPC4-210ENST00000531290 SPRYD7Q5W111 196 aa27.85■■■□□ 2.05
TRAPPC4-210ENST00000531290 TDRD3Q9H7E2 651 aaKnown RBP27.85■■■□□ 2.05
TRAPPC4-210ENST00000531290 TBC1D8O95759 1140 aa27.84■■■□□ 2.05
TRAPPC4-210ENST00000531290 RFX5P48382 616 aaPredicted RBP27.84■■■□□ 2.05
TRAPPC4-210ENST00000531290 SPDYE2Q495Y8 402 aa27.84■■■□□ 2.05
TRAPPC4-210ENST00000531290 UNCXA6NJT0 531 aa27.83■■■□□ 2.05
TRAPPC4-210ENST00000531290 SLC5A1P13866 664 aa27.82■■■□□ 2.04
TRAPPC4-210ENST00000531290 FGFR2P21802 821 aa27.82■■■□□ 2.04
TRAPPC4-210ENST00000531290 IREB2P48200 963 aaKnown RBP27.82■■■□□ 2.04
TRAPPC4-210ENST00000531290 LPIN2Q92539 896 aa27.82■■■□□ 2.04
TRAPPC4-210ENST00000531290 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
TRAPPC4-210ENST00000531290 TNNI2P48788 182 aa27.81■■■□□ 2.04
TRAPPC4-210ENST00000531290 RARSP54136 660 aaKnown RBP27.81■■■□□ 2.04
TRAPPC4-210ENST00000531290 HDLBPQ00341 1268 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms