RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
CPSF1-205ENST00000531042 PTPRCP08575 1304 aa19.92■□□□□ 0.78
CPSF1-205ENST00000531042 NF2P35240 595 aa19.91■□□□□ 0.78
CPSF1-205ENST00000531042 UBE4AQ14139 1066 aa19.91■□□□□ 0.78
CPSF1-205ENST00000531042 DLGAP5Q15398 846 aa19.91■□□□□ 0.78
CPSF1-205ENST00000531042 REM2Q8IYK8 340 aaPredicted RBP19.91■□□□□ 0.78
CPSF1-205ENST00000531042 MTMR14Q8NCE2 650 aa19.91■□□□□ 0.78
CPSF1-205ENST00000531042 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
CPSF1-205ENST00000531042 PUS3Q9BZE2 481 aaKnown RBP19.91■□□□□ 0.78
CPSF1-205ENST00000531042 ECM29Q5VYK3 1845 aa19.9■□□□□ 0.78
CPSF1-205ENST00000531042 TRPA1O75762 1119 aa19.9■□□□□ 0.78
CPSF1-205ENST00000531042 TTLL12Q14166 644 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-205ENST00000531042 RABL6Q3YEC7 729 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-205ENST00000531042 BICC1Q9H694 974 aaKnown RBP19.9■□□□□ 0.78
CPSF1-205ENST00000531042 RIPOR2Q9Y4F9 1068 aa19.9■□□□□ 0.78
CPSF1-205ENST00000531042 F8W031 263 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-205ENST00000531042 MCOLN1Q9GZU1 580 aa19.89■□□□□ 0.77
CPSF1-205ENST00000531042 JAG2Q9Y219 1238 aa19.89■□□□□ 0.77
CPSF1-205ENST00000531042 COL1A1P02452 1464 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-205ENST00000531042 FAM205AQ6ZU69 1335 aa19.88■□□□□ 0.77
CPSF1-205ENST00000531042 MROH5Q6ZUA9 1318 aa19.88■□□□□ 0.77
CPSF1-205ENST00000531042 ANKRD44Q8N8A2 993 aa19.88■□□□□ 0.77
CPSF1-205ENST00000531042 TDRD7Q8NHU6 1098 aaKnown RBP19.88■□□□□ 0.77
CPSF1-205ENST00000531042 CDCA7LQ96GN5 454 aa19.88■□□□□ 0.77
CPSF1-205ENST00000531042 PCDHAC2Q9Y5I4 1007 aa19.88■□□□□ 0.77
CPSF1-205ENST00000531042 HIBADHP31937 336 aaKnown RBP19.87■□□□□ 0.77
CPSF1-205ENST00000531042 GYG1P46976 350 aa19.87■□□□□ 0.77
CPSF1-205ENST00000531042 ALDH1L2Q3SY69 923 aa19.87■□□□□ 0.77
CPSF1-205ENST00000531042 CFAP100Q494V2 611 aa19.87■□□□□ 0.77
CPSF1-205ENST00000531042 FAM84BQ96KN1 310 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-205ENST00000531042 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
CPSF1-205ENST00000531042 SPDYE2BA6NHP3 402 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 CCDC85CA6NKD9 419 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 SPDYE6P0CI01 402 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 DGKZQ13574 1117 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 ARMC9Q7Z3E5 817 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-205ENST00000531042 USP44Q9H0E7 712 aa19.86■□□□□ 0.77
CPSF1-205ENST00000531042 MYO1BO43795 1136 aa19.85■□□□□ 0.77
CPSF1-205ENST00000531042 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
CPSF1-205ENST00000531042 PRKG1Q13976 671 aa19.85■□□□□ 0.77
CPSF1-205ENST00000531042 LRRC24Q50LG9 513 aa19.85■□□□□ 0.77
CPSF1-205ENST00000531042 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
CPSF1-205ENST00000531042 PPP2R3BQ9Y5P8 575 aa19.85■□□□□ 0.77
CPSF1-205ENST00000531042 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
CPSF1-205ENST00000531042 LDLRAD1Q5T700 205 aa19.84■□□□□ 0.77
CPSF1-205ENST00000531042 ANGEL1Q9UNK9 670 aaKnown RBP19.84■□□□□ 0.77
CPSF1-205ENST00000531042 AOX1Q06278 1338 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 ARAP2Q8WZ64 1704 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 CLRN2A0PK11 232 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 TM4SF4P48230 202 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 RBM5P52756 815 aaKnown RBP eCLIP19.83■□□□□ 0.772e-6■□□□□ 9.9
CPSF1-205ENST00000531042 METTL24Q5JXM2 366 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 SMC4Q9NTJ3 1288 aa19.83■□□□□ 0.77
CPSF1-205ENST00000531042 PDE8BO95263 885 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 FBXO33Q7Z6M2 555 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 VGLL2Q8N8G2 317 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 KLHDC4Q8TBB5 520 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 VEZTQ9HBM0 779 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 TTF2Q9UNY4 1162 aaKnown RBP19.82■□□□□ 0.76
CPSF1-205ENST00000531042 FZD1Q9UP38 647 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 SSC5DA1L4H1 1573 aa19.82■□□□□ 0.76
CPSF1-205ENST00000531042 MKRN3Q13064 507 aaKnown RBP19.81■□□□□ 0.76
CPSF1-205ENST00000531042 MAP3K11Q16584 847 aa19.81■□□□□ 0.76
CPSF1-205ENST00000531042 VPS37DQ86XT2 251 aa19.81■□□□□ 0.76
CPSF1-205ENST00000531042 SERPINA10Q9UK55 444 aa19.81■□□□□ 0.76
CPSF1-205ENST00000531042 PPP1R12BO60237 982 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-205ENST00000531042 CT47B1P0C2W7 299 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-205ENST00000531042 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
CPSF1-205ENST00000531042 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
CPSF1-205ENST00000531042 RFX5P48382 616 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-205ENST00000531042 SREBF2Q12772 1141 aa19.79■□□□□ 0.76
CPSF1-205ENST00000531042 SUPT20HL1Q3ZLR7 823 aa19.79■□□□□ 0.76
CPSF1-205ENST00000531042 NBPF12Q5TAG4 269 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-205ENST00000531042 SPRYD7Q5W111 196 aa19.79■□□□□ 0.76
CPSF1-205ENST00000531042 IQSEC3Q9UPP2 1182 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-205ENST00000531042 TBC1D8O95759 1140 aa19.78■□□□□ 0.76
CPSF1-205ENST00000531042 CRKP46108 304 aa19.78■□□□□ 0.76
CPSF1-205ENST00000531042 RGS19P49795 217 aa19.78■□□□□ 0.76
CPSF1-205ENST00000531042 RASA3Q14644 834 aa19.78■□□□□ 0.76
CPSF1-205ENST00000531042 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
CPSF1-205ENST00000531042 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
CPSF1-205ENST00000531042 ZNF70Q9UC06 446 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-205ENST00000531042 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-205ENST00000531042 BCAMP50895 628 aa19.77■□□□□ 0.76
CPSF1-205ENST00000531042 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-205ENST00000531042 GRIK5Q16478 980 aa19.77■□□□□ 0.76
CPSF1-205ENST00000531042 DZIP1LQ8IYY4 767 aaKnown RBP19.77■□□□□ 0.76
CPSF1-205ENST00000531042 SLC10A4Q96EP9 437 aa19.77■□□□□ 0.76
CPSF1-205ENST00000531042 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
CPSF1-205ENST00000531042 UNCXA6NJT0 531 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 EYA2O00167 538 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 FGFR2P21802 821 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 TNFAIP1Q13829 316 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
CPSF1-205ENST00000531042 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
CPSF1-205ENST00000531042 TBC1D22AQ8WUA7 517 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
CPSF1-205ENST00000531042 USP2O75604 605 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms