RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 PRKG1Q13976 671 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 SLC9C1Q4G0N8 1177 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 RIC3Q7Z5B4 369 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 CD99L2Q8TCZ2 262 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 ZNF333Q96JL9 665 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 SCAF8Q9UPN6 1271 aaKnown RBP6.86□□□□□ -1.31
VPS11-204ENST00000530809 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS11-204ENST00000530809 MYO1BO43795 1136 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 SASH1O94885 1247 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 TMPOP42166 694 aaKnown RBP6.85□□□□□ -1.31
VPS11-204ENST00000530809 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
VPS11-204ENST00000530809 CCT4P50991 539 aaKnown RBP6.85□□□□□ -1.31
VPS11-204ENST00000530809 CRHR2Q13324 411 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 SLC4A8Q2Y0W8 1093 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 SUPT20HL1Q3ZLR7 823 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 MTMR14Q8NCE2 650 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 FBXW7Q969H0 707 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 ZNF428Q96B54 188 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 ZBED3Q96IU2 234 aaPredicted RBP6.85□□□□□ -1.31
VPS11-204ENST00000530809 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 DEFB129Q9H1M3 183 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 BSDC1Q9NW68 430 aaPredicted RBP6.85□□□□□ -1.31
VPS11-204ENST00000530809 LEMD3Q9Y2U8 911 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 MGAMO43451 1857 aa6.85□□□□□ -1.31
VPS11-204ENST00000530809 ZNF804BA4D1E1 1349 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 TESPA1A2RU30 521 aaPredicted RBP6.84□□□□□ -1.31
VPS11-204ENST00000530809 WDHD1O75717 1129 aaPredicted RBP6.84□□□□□ -1.31
VPS11-204ENST00000530809 GNRH1P01148 92 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 CTSWP56202 376 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 DLGAP5Q15398 846 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 KIAA0825Q8IV33 1275 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 ANKRD13AQ8IZ07 590 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 RUNDC1Q96C34 613 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 CWC25Q9NXE8 425 aaPredicted RBP6.84□□□□□ -1.31
VPS11-204ENST00000530809 ZSWIM8A7E2V4 1837 aa6.84□□□□□ -1.31
VPS11-204ENST00000530809 H0YGN5 161 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 DLL1O00548 723 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 DDX58O95786 925 aaKnown RBP6.83□□□□□ -1.32
VPS11-204ENST00000530809 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
VPS11-204ENST00000530809 PRMT2P55345 433 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 AAMPQ13685 434 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 TNFAIP1Q13829 316 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 KIF22Q14807 665 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 KRT24Q2M2I5 525 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
VPS11-204ENST00000530809 CLMNQ96JQ2 1002 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 MYD88Q99836 296 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 ANKRD2Q9GZV1 360 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 ZFYVE28Q9HCC9 887 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 TSHZ2Q9NRE2 1034 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 MINPP1Q9UNW1 487 aa6.83□□□□□ -1.32
VPS11-204ENST00000530809 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
VPS11-204ENST00000530809 A0A1W2PPC1 479 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 IGHMBP2P38935 993 aaKnown RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 GTF2A2P52657 109 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 FKBP1AP62942 108 aaKnown RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 GTF2IP78347 998 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 SLFN5Q08AF3 891 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 CHRDL2Q6WN34 429 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 WDR63Q8IWG1 891 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 SLC17A8Q8NDX2 589 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 TTLL11Q8NHH1 800 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 NKX2-3Q8TAU0 364 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 HTATIP2Q9BUP3 242 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 METTL22Q9BUU2 404 aaPredicted RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 MXD3Q9BW11 206 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 ZCCHC17Q9NP64 241 aaKnown RBP6.82□□□□□ -1.32
VPS11-204ENST00000530809 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
VPS11-204ENST00000530809 HTTP42858 3142 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 TRIOBPQ9H2D6 2365 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 USP2O75604 605 aaPredicted RBP6.81□□□□□ -1.32
VPS11-204ENST00000530809 CAPN2P17655 700 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 GJA5P36382 358 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 NEXNQ0ZGT2 675 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 NEUROD2Q15784 382 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 OPTNQ96CV9 577 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 MS4A4AQ96JQ5 239 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 PTPN18Q99952 460 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 PHAXQ9H814 394 aaKnown RBP6.81□□□□□ -1.32
VPS11-204ENST00000530809 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.81□□□□□ -1.32
VPS11-204ENST00000530809 RBM27Q9P2N5 1060 aaKnown RBP6.81□□□□□ -1.32
VPS11-204ENST00000530809 FZD1Q9UP38 647 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 MYH13Q9UKX3 1938 aa6.81□□□□□ -1.32
VPS11-204ENST00000530809 IL16Q14005 1332 aa6.8□□□□□ -1.32
VPS11-204ENST00000530809 APAF1O14727 1248 aa6.8□□□□□ -1.32
VPS11-204ENST00000530809 KCNJ4P48050 445 aa6.8□□□□□ -1.32
VPS11-204ENST00000530809 MNX1P50219 401 aaPredicted RBP6.8□□□□□ -1.32
VPS11-204ENST00000530809 IRX6P78412 446 aaPredicted RBP6.8□□□□□ -1.32
VPS11-204ENST00000530809 LACTBP83111 547 aaPredicted RBP6.8□□□□□ -1.32
VPS11-204ENST00000530809 CALD1Q05682 793 aaKnown RBP6.8□□□□□ -1.32
VPS11-204ENST00000530809 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
VPS11-204ENST00000530809 NBPF12Q5TAG4 269 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms